RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
COL6A6-201ENST00000358511 B9D1Q9UPM9 204 aa7.86□□□□□ -1.15
COL6A6-201ENST00000358511 MED19A0JLT2 244 aaPredicted RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 DIRC3C9JPN6 131 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 OR5G3P0C626 314 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 MUC1P15941 1255 aaPredicted RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 ASCL1P50553 236 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 DYNLT3P51808 116 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 C9orf135Q5VTT2 229 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 FAM174AQ8TBP5 190 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 OR2A5Q96R48 311 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 GUSBP08236 651 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 HLA-GP17693 338 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 HOXA6P31267 233 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 BRS3P32247 399 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 LPAL2Q16609 132 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 MORN1Q5T089 497 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 SLC35E3Q7Z769 313 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 ADAT1Q9BUB4 502 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 SLC46A2Q9BY10 475 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 FAM24AA6NFZ4 105 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 LRRC30A6NM36 301 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 K7ESM1 405 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 ADAP1O75689 374 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CYBAP13498 195 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 AREGP15514 252 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CEBPBP17676 345 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 SRP14P37108 136 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 ZFP64Q9NPA5 681 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 A0A087WUJ7 227 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 EDDM3AQ14507 147 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 BPIFA4PQ86YQ2 179 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 PTRH2Q9Y3E5 179 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 TIMM10BQ9Y5J6 103 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 IGLV3-27P01718 113 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 OR5AL1P0C617 328 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 HOXB1P14653 301 aaPredicted RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 RPS27P42677 84 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CSNK1EP49674 416 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 EDDM3BP56851 147 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 OR2D3Q8NGH3 330 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 FBLIM1Q8WUP2 373 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CLDN23Q96B33 292 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 TBX15Q96SF7 602 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 PLAC1Q9HBJ0 212 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 HPP00738 406 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CD82P27701 267 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 ACAA2P42765 397 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 FUT6P51993 359 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 PRAMEF20Q5VT98 475 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 OR4B1Q8NGF8 309 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 MRPS24Q96EL2 167 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CALHM2Q9HA72 323 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 MSL2Q9HCI7 577 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 C20orf141Q9NUB4 165 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 ROS1P08922 2347 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 M0QZ24 198 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 CDC14BO60729 498 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 GOSR1O95249 250 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 THBS4P35443 961 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 RHOBP62745 196 aa7.85□□□□□ -1.15
COL6A6-201ENST00000358511 RAE1P78406 368 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 PUSL1Q8N0Z8 303 aaKnown RBP7.85□□□□□ -1.15
COL6A6-201ENST00000358511 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 FGF17O60258 216 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ICOSLGO75144 302 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 HOXA4Q00056 320 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 DMKNQ6E0U4 476 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 DHRS7BQ6IAN0 325 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 C12orf54Q6X4T0 127 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 TSEN54Q7Z6J9 526 aaKnown RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZDHHC23Q8IYP9 409 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 GSN-AS1Q9NRJ2 163 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 RCC2Q9P258 522 aaKnown RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 PIAS3Q9Y6X2 628 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 FAHP16930 419 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF600Q6ZNG1 722 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 UQCR10Q9UDW1 63 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 TMEM265A0A087WTH1 108 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 LANCL1O43813 399 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 DUSP23Q9BVJ7 150 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZSWIM8A7E2V4 1837 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 SEC11BP0C7V7 166 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 KHDC3LQ587J8 217 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 LDLRAD3Q86YD5 345 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 OR10G8Q8NGN5 311 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 BCL2L2Q92843 193 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 SLC45A2Q9UMX9 530 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 MASP2O00187 686 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 SOX15O60248 233 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 FUT3P21217 361 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 DCDP81605 110 aaKnown RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 PABPC1L2AQ5JQF8 200 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 MRGPRGQ86SM5 289 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 C16orf52Q8NHV5 167 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 SPSB1Q96BD6 273 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 HOXD4P09016 255 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 CDX1P47902 265 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms