RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.4
IFT20-202ENST00000357896 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 TCF23Q7RTU1 214 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 TRPM8Q7Z2W7 1104 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 OR9Q2Q8NGE9 314 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 SNX22Q96L94 193 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 MED20Q9H944 212 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 GPR84Q9NQS5 396 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
IFT20-202ENST00000357896 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
IFT20-202ENST00000357896 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 HSPE1-MOB4S4R3N1 261 aa12.53□□□□□ -0.4
IFT20-202ENST00000357896 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 PQLC2LA1A4F0 135 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 FAM183AA6NL82 134 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 DLGAP1O14490 977 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 PSME3P61289 254 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 CLVS2Q5SYC1 327 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 ASRGL1Q7L266 308 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 KRT77Q7Z794 578 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 BATF2Q8N1L9 274 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 OR8U1Q8NH10 309 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 OR51V1Q9H2C8 321 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 SPAG4Q9NPE6 437 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 DNAJB9Q9UBS3 223 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 LYVE1Q9Y5Y7 322 aa12.52□□□□□ -0.41
IFT20-202ENST00000357896 ARRDC5A6NEK1 342 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 SEC14L6B5MCN3 397 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 TNFRSF11BO00300 401 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 DHRS3O75911 302 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 PEX2P28328 305 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 IL24Q13007 206 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 TRAPPC6BQ86SZ2 158 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 OR51E1Q8TCB6 317 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 DUX3Q96PT4 197 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 PKIBQ9C010 78 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 PBOV1Q9GZY1 135 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 FGFR1OP2Q9NVK5 253 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 ARMC1Q9NVT9 282 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 FAM206AQ9NX38 181 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 SCOCQ9UIL1 159 aa12.51□□□□□ -0.41
IFT20-202ENST00000357896 UBE2J1Q9Y385 318 aaPredicted RBP12.51□□□□□ -0.41
IFT20-202ENST00000357896 OOSP1A8MZH6 123 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 TOR1AO14656 332 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 SELENOFO60613 162 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 CCNB2O95067 398 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 SOX14O95416 240 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 IGLV3-1P01715 115 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
IFT20-202ENST00000357896 GRK1Q15835 563 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 SLX4IPQ5VYV7 408 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 TMEM42Q69YG0 159 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 THNSL2Q86YJ6 484 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 AQP11Q8NBQ7 271 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 NOL4LQ96MY1 436 aaPredicted RBP12.5□□□□□ -0.41
IFT20-202ENST00000357896 MROQ9BYG7 248 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 GAL3ST2Q9H3Q3 398 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 ZMAT4Q9H898 229 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 MAGEL2Q9UJ55 1249 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 LAMP5Q9UJQ1 280 aa12.5□□□□□ -0.41
IFT20-202ENST00000357896 SIRT4Q9Y6E7 314 aaPredicted RBP12.5□□□□□ -0.41
IFT20-202ENST00000357896 HUWE1Q7Z6Z7 4374 aaKnown RBP12.5□□□□□ -0.41
IFT20-202ENST00000357896 TMEM82A0PJX8 343 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 MMP23AO75900 390 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 ALOX5APP20292 161 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 PRRX1P54821 245 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 ESRRGP62508 458 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 KIR2DS1Q14954 304 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 TPTE2P1Q5T6R2 138 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 ANGPTL5Q86XS5 388 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 FOXRED2Q8IWF2 684 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 RNF148Q8N7C7 305 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 CEP19Q96LK0 163 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 NSMCE2Q96MF7 247 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 CITED4Q96RK1 184 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 TEAD3Q99594 435 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 KRTAP17-1Q9BYP8 105 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 DCLRE1BQ9H816 532 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 SEBOXQ9HB31 216 aaPredicted RBP12.49□□□□□ -0.41
IFT20-202ENST00000357896 PCDHB16Q9NRJ7 776 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 GPR173Q9NS66 373 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 KLHDC2Q9Y2U9 406 aa12.49□□□□□ -0.41
IFT20-202ENST00000357896 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 PRODHO43272 600 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 CCDC22O60826 627 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 GABRR1P24046 479 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 ERP29P30040 261 aaKnown RBP12.48□□□□□ -0.41
IFT20-202ENST00000357896 CGB2Q6NT52 195 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 ENTHD1Q8IYW4 607 aa12.48□□□□□ -0.41
IFT20-202ENST00000357896 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms