RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 EWSR1Q01844 656 aaKnown RBP eCLIP6.72□□□□□ -1.331e-6■■□□□ 12.9
CD46-204ENST00000357714 ZNF266Q14584 549 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 IL13RA2Q14627 380 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 TMEM187Q14656 261 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 C1orf189Q5VU69 101 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 REC114Q7Z4M0 266 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 LGI3Q8N145 548 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 CYB561D1Q8N8Q1 229 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 NAXEQ8NCW5 288 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 ST8SIA1Q92185 356 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 BADQ92934 168 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 ATG101Q9BSB4 218 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 FAAP24Q9BTP7 215 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 ZNF160Q9HCG1 818 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 ALKBH4Q9NXW9 302 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 WSB1Q9Y6I7 421 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 SDK1Q7Z5N4 2213 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 IGKV3D-11A0A0A0MRZ8 115 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 TCRBV21S2A2A0A5A6 115 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 FAM221AA4D161 298 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 C5orf63A6NC05 138 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 LIPT2A6NK58 231 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 NR2C1P13056 603 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 FZD2Q14332 565 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 PPA1Q15181 289 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 LIAT1Q6ZQX7 453 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 OR2C3Q8N628 320 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 TVP23CQ96ET8 276 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 TMEM68Q96MH6 324 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 SYT3Q9BQG1 590 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 SLC2A9Q9NRM0 540 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 NECAP2Q9NVZ3 263 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 SLC7A11Q9UPY5 501 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 TMED3Q9Y3Q3 217 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 HS3ST3B1Q9Y662 390 aa6.72□□□□□ -1.33
CD46-204ENST00000357714 CCDC163A0A0D9SF12 145 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 ANKUB1A6NFN9 424 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 SLC33A1O00400 549 aaPredicted RBP6.71□□□□□ -1.33
CD46-204ENST00000357714 ANGPTL7O43827 346 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 SNRPCP09234 159 aaKnown RBP6.71□□□□□ -1.33
CD46-204ENST00000357714 ZNF43P17038 809 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 BLKP51451 505 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 FOXL2P58012 376 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 SPCS3P61009 180 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 C17orf67Q0P5P2 114 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 MYBPHQ13203 477 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 TMEM176BQ3YBM2 270 aaPredicted RBP6.71□□□□□ -1.33
CD46-204ENST00000357714 LANCL3Q6ZV70 420 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 HIST3H2BBQ8N257 126 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 NOXO1Q8NFA2 376 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 HPSE2Q8WWQ2 592 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 LIME1Q9H400 295 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 KIAA1456Q9P272 454 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 CA14Q9ULX7 337 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 CHD9Q3L8U1 2897 aa6.71□□□□□ -1.33
CD46-204ENST00000357714 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 A0A1W2PNR3 127 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 NPIPB13A6NJU9 1138 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 NPIPB4C9JG80 1138 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 HSD17B6O14756 317 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 ATXN7O15265 892 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 RRP8O43159 456 aaKnown RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 ONECUT2O95948 504 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 SRP19P09132 144 aaKnown RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 QDPRP09417 244 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 PKIAP61925 76 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 VAMP2P63027 116 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 BRICD5Q6PL45 260 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 TMEM92Q6UXU6 159 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 C20orf196Q8IYI0 205 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 TMEM217Q8N7C4 229 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 OR11L1Q8NGX0 322 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 CPNE4Q96A23 557 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 LRRC61Q9BV99 259 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 MRPL13Q9BYD1 178 aaKnown RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 C8orf33Q9H7E9 229 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 KLRF1Q9NZS2 232 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 B3GAT1Q9P2W7 334 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 PIGLQ9Y2B2 252 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 PHF3Q92576 2039 aaKnown RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 SHANK1Q9Y566 2161 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 ELOA3CA0A087WX78 387 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 A0A1B0GW64 132 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 SMCO3A2RU48 225 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 E9PLN8 166 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 PTBP3O95758 552 aaKnown RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 TRGC1P0CF51 173 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 FBLP22087 321 aaKnown RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 CTHP32929 405 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 ZNF41P51814 821 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 ZNF133P52736 654 aaPredicted RBP6.71□□□□□ -1.34
CD46-204ENST00000357714 EFNA3P52797 238 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 MTCP1P56278 107 aa6.71□□□□□ -1.34
CD46-204ENST00000357714 LSM6P62312 80 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms