RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 MYEF2Q9P2K5 600 aaKnown RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 ZFPL1O95159 310 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 FOXG1P55316 489 aaPredicted RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 SMCO1Q147U7 214 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 KRT74Q7RTS7 529 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 PHC2Q8IXK0 858 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 FOXC2Q99958 501 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 LIN7BQ9HAP6 207 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 DEFB108AA8MXU0 73 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 AKR7A2O43488 359 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 SLC2A2P11168 524 aaPredicted RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 RNASE12Q5GAN4 147 aaKnown RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 SNX29P2Q8IUI4 249 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 PARP16Q8N5Y8 322 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 DVL3Q92997 716 aaPredicted RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 CCL13Q99616 98 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 TMEM246Q9BRR3 403 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 SOX7Q9BT81 388 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 NPDC1Q9NQX5 325 aaPredicted RBP7.83□□□□□ -1.16
UPF2-202ENST00000357604 AUP1Q9Y679 476 aa7.83□□□□□ -1.16
UPF2-202ENST00000357604 MEF2CQ06413 473 aaPredicted RBP7.82□□□□□ -1.16
UPF2-202ENST00000357604 ZNF181Q2M3W8 571 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 ARID1BQ8NFD5 2236 aaPredicted RBP7.82□□□□□ -1.16
UPF2-202ENST00000357604 SCN2AQ99250 2005 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 FUT4P22083 530 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 GPR12P47775 334 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 TAS2R31P59538 309 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 FGF12P61328 243 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 SSX1Q16384 188 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 OR10R2Q8NGX6 335 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 LILRB1Q8NHL6 650 aaPredicted RBP7.82□□□□□ -1.16
UPF2-202ENST00000357604 MBD6Q96DN6 1003 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 COPZ2Q9P299 210 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 TOX4O94842 621 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 HGFACQ04756 655 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 STEAP3Q658P3 488 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 SSX6Q7RTT6 188 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 FGFBP3Q8TAT2 258 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 TRIM77I1YAP6 450 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 PDCD6O75340 191 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 ARG1P05089 322 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 GABRB1P18505 474 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 RPP30P78346 268 aaKnown RBP7.82□□□□□ -1.16
UPF2-202ENST00000357604 SCGB2B2Q4G0G5 96 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 DTX2Q86UW9 622 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 OR10K1Q8NGX5 313 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 OR51E2Q9H255 320 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 CNTD2Q9H8S5 307 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 RHBDL2Q9NX52 303 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 UBE2J1Q9Y385 318 aaPredicted RBP7.82□□□□□ -1.16
UPF2-202ENST00000357604 GPR179Q6PRD1 2367 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 TRBV5-5A0A0J9YX44 114 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 PLAUP00749 431 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 IFNA21P01568 189 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 S100A7P31151 101 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 LTC4SQ16873 150 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 CLEC9AQ6UXN8 241 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 ACP7Q6ZNF0 438 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 OR4K15Q8NH41 348 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 AQP3Q92482 292 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 ZMAT3Q9HA38 289 aaKnown RBP7.82□□□□□ -1.16
UPF2-202ENST00000357604 CACFD1Q9UGQ2 172 aa7.82□□□□□ -1.16
UPF2-202ENST00000357604 ZFHX2Q9C0A1 2572 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 TEX13DA0A0J9YY54 714 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 TXNL1O43396 289 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 OR3A4PP47883 348 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 BPIFB3P59826 476 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 RNASE10Q5GAN6 216 aaKnown RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 FBLIM1Q8WUP2 373 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 ISOC1Q96CN7 298 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 BANF2Q9H503 90 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 PITPNC1Q9UKF7 332 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 CEP350Q5VT06 3117 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 NAP1L6A6NFF2 107 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 C19orf84I3L1E1 186 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 TAS2R19P59542 299 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 RPL31P62899 125 aaKnown RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 RSBN1Q5VWQ0 802 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 LGALS14Q8TCE9 139 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 PRRT1Q99946 306 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 PCGF1Q9BSM1 259 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 REG4Q9BYZ8 158 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 C12orf4Q9NQ89 552 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 RFPL4AA6NLU0 287 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 ZNF729A6NN14 1252 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 RFPL4AL1F8VTS6 287 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 TMEM178BH3BS89 294 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 SULT1C2O00338 296 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 MECP2P51608 486 aaKnown RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 LUMP51884 338 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 METAP1DQ6UB28 335 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 SNAPC3Q92966 411 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 PHB2Q99623 299 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 C1RLQ9NZP8 487 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 KIF25Q9UIL4 384 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 IFITM5A6NNB3 132 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 WRBO00258 174 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 RLN1P04808 185 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms