RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HES4Q9HCC6 221 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 LIPT2A6NK58 231 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 K7EQS6 105 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 M0R1X1 148 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 FFAR1O14842 300 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 MBTPS2O43462 519 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 EML2O95834 649 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 CST2P09228 141 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 CBLN3Q6UW01 205 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF429Q86V71 674 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 CNTD2Q9H8S5 307 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 ZDHHC11Q9H8X9 412 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 GNB4Q9HAV0 340 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 TDRD6O60522 2096 aaKnown RBP10.42□□□□□ -0.74
COL9A1-202ENST00000357250 CYR61O00622 381 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 RGS13O14921 159 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 CST7O76096 145 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 MBPP02686 304 aaPredicted RBP10.42□□□□□ -0.74
COL9A1-202ENST00000357250 BMI1P35226 326 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 GNB1P62873 340 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 COL19A1Q14993 1142 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 MIDNQ504T8 468 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF774Q6NX45 483 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 STPG2Q8N412 459 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM230Q96A57 120 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 GAL3ST2Q9H3Q3 398 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 TMPRSS5Q9H3S3 457 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 CLEC1BQ9P126 229 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 LSM2Q9Y333 95 aaKnown RBP10.42□□□□□ -0.74
COL9A1-202ENST00000357250 KIF13BQ9NQT8 1826 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 GREM1O60565 184 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF17P17021 662 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 F2RP25116 425 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 MEOX1P50221 254 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 FAM60AQ9NP50 221 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 FSCN3Q9NQT6 498 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 OR6C3Q9NZP0 311 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 FLRT3Q9NZU0 649 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 ERRFI1Q9UJM3 462 aaPredicted RBP10.42□□□□□ -0.74
COL9A1-202ENST00000357250 PLXNA1Q9UIW2 1896 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 OR4C45A6NMZ5 311 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 GZMMP51124 257 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 SLC38A11Q08AI6 406 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 PNRC1Q12796 327 aaPredicted RBP10.42□□□□□ -0.74
COL9A1-202ENST00000357250 GGNBP1Q5YKI7 109 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 MRGPREQ86SM8 312 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 RNF2Q99496 336 aa10.42□□□□□ -0.74
COL9A1-202ENST00000357250 NXF2Q9GZY0 626 aaKnown RBP10.42□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF320A2RRD8 509 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 ACTL6AO96019 429 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 PTHLHP12272 177 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 MVDP53602 400 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF816Q0VGE8 651 aaPredicted RBP10.41□□□□□ -0.74
COL9A1-202ENST00000357250 MOGAT2Q3SYC2 334 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 NHLRC2Q8NBF2 726 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 CA10Q9NS85 328 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 CES1P1Q9UKY3 287 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 TIMM9Q9Y5J7 89 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 V9GYH0 126 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 UBE2L5PA0A1B0GUS4 154 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 SEC14L6B5MCN3 397 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 M0QZ24 198 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 MMP16P51512 607 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 RPL11P62913 178 aaKnown RBP10.41□□□□□ -0.74
COL9A1-202ENST00000357250 PMP22Q01453 160 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 RAB32Q13637 225 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 C9orf152Q5JTZ5 239 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 OR2T6Q8NHC8 308 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 C2CD4CQ8TF44 421 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 CMBLQ96DG6 245 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 PIKFYVEQ9Y2I7 2098 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 A0A1W2PPV9 198 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 KRASP01116 189 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 NGFRP08138 427 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 GABRA1P14867 456 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 CEACAM6P40199 344 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 RFC3P40938 356 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 TPPP2P59282 170 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 COX19Q49B96 90 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 MESTQ5EB52 335 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 AKR1E2Q96JD6 320 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF768Q9H5H4 540 aaKnown RBP10.41□□□□□ -0.74
COL9A1-202ENST00000357250 ANXA10Q9UJ72 324 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 hADV38S2A0JD32 116 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 DBX1A6NMT0 343 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 C21orf140B9A014 251 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 IL9P15248 144 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 LPAR6P43657 344 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 P2RY1P47900 373 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 LIMK1P53667 647 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 SLC37A1P57057 533 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 FOXO1Q12778 655 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 SKP2Q13309 424 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM211Q6ICI0 200 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 MAFAQ8NHW3 353 aaPredicted RBP10.41□□□□□ -0.74
COL9A1-202ENST00000357250 ZNRF4Q8WWF5 429 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 FAAP24Q9BTP7 215 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms