RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SLC17A1Q14916 467 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 LDLRAD2Q5SZI1 272 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 AGBL4Q5VU57 503 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 ZDHHC6Q9H6R6 413 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 SRA1Q9HD15 236 aaKnown RBP13.8□□□□□ -0.2
RTN3-205ENST00000356000 FBXO34Q9NWN3 711 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 CISD1Q9NZ45 108 aaKnown RBP13.8□□□□□ -0.2
RTN3-205ENST00000356000 IL19Q9UHD0 177 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 INSL5Q9Y5Q6 135 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 TRAPPC6AO75865 159 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 TCN2P20062 427 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 CCR5P51681 352 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 Q6ZWC4 215 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 OR2V1Q8NHB1 315 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 RNF24Q9Y225 148 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 CYR61O00622 381 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 BNIP3LO60238 219 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 WDR1O75083 606 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 CTXN2P0C2S0 81 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 HIST1H1TP22492 207 aaPredicted RBP13.79□□□□□ -0.2
RTN3-205ENST00000356000 MESP2Q0VG99 397 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 CTXN3Q4LDR2 81 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 TCEAL5Q5H9L2 206 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 DCST2Q5T1A1 773 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 NECAP1Q8NC96 275 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 OR5B12Q96R08 314 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 MKKSQ9NPJ1 570 aaPredicted RBP13.79□□□□□ -0.2
RTN3-205ENST00000356000 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.79□□□□□ -0.2
RTN3-205ENST00000356000 ZNF701Q9NV72 531 aaPredicted RBP13.79□□□□□ -0.2
RTN3-205ENST00000356000 ZNF780BQ9Y6R6 833 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 C4orf51C9J302 202 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 FGF17O60258 216 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 CD33P20138 364 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 DNASE1L1P49184 302 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 UNQ5815/PRO19632Q6UWF5 114 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 Q6ZVH6 145 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 FBXL14Q8N1E6 418 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 ADOQ96SZ5 270 aa13.79□□□□□ -0.2
RTN3-205ENST00000356000 C14orf166Q9Y224 244 aaKnown RBP13.79□□□□□ -0.2
RTN3-205ENST00000356000 LILRA1O75019 489 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 SEMA4FO95754 770 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 DDAH2O95865 285 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 BMP5P22003 454 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 RAB38P57729 211 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 RPS4XP62701 263 aaKnown RBP13.78□□□□□ -0.2
RTN3-205ENST00000356000 FBXO42Q6P3S6 717 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 EHFQ9NZC4 300 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 WIPI2Q9Y4P8 454 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 CAPZBP47756 277 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 C10orf53Q8N6V4 93 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 OR4B1Q8NGF8 309 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 NRTNQ99748 197 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 UQCR10Q9UDW1 63 aa13.78□□□□□ -0.2
RTN3-205ENST00000356000 ZNF840PA6NDX5 716 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 NPIPA2E9PIF3 369 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 BPNT1O95861 308 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 HRASP01112 189 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 CTRLP40313 264 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 MRPS6P82932 125 aaKnown RBP13.77□□□□□ -0.2
RTN3-205ENST00000356000 EWSR1Q01844 656 aaKnown RBP eCLIP13.77□□□□□ -0.2
RTN3-205ENST00000356000 MEP1BQ16820 701 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 CST9LP1Q5W188 147 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 FCRL6Q6DN72 434 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 OTOSQ8NHW6 89 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 GPR146Q96CH1 333 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 LRFN3Q9BTN0 628 aa13.77□□□□□ -0.2
RTN3-205ENST00000356000 TCF20Q9UGU0 1960 aaKnown RBP13.77□□□□□ -0.2
RTN3-205ENST00000356000 ZNF732B4DXR9 585 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
RTN3-205ENST00000356000 PAFAH1B2P68402 229 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 DPPA3Q6W0C5 159 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 OR14C36Q8NHC7 312 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 ZNF845Q96IR2 970 aaPredicted RBP13.77□□□□□ -0.21
RTN3-205ENST00000356000 KLF16Q9BXK1 252 aaPredicted RBP13.77□□□□□ -0.21
RTN3-205ENST00000356000 ZBP1Q9H171 429 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 GNG13Q9P2W3 67 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 ZNF320A2RRD8 509 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 H7BYZ3 331 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 J3QW42 95 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 DBHP09172 617 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 ERGP11308 486 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 ASCL1P50553 236 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 TRMT12Q53H54 448 aaKnown RBP13.77□□□□□ -0.21
RTN3-205ENST00000356000 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 APH1AQ96BI3 265 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 P2RX4Q99571 388 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 ABHD6Q9BV23 337 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 NAT8Q9UHE5 227 aa13.77□□□□□ -0.21
RTN3-205ENST00000356000 A0A1B0GUS0 222 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 AHRRA9YTQ3 701 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
RTN3-205ENST00000356000 OR6A2O95222 327 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 BCL2P10415 239 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 SFTPDP35247 375 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms