RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TEX38Q6PEX7 206 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 TMEM123Q8N131 208 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 TMEM229BQ8NBD8 167 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
SMG6-202ENST00000354901 NOL4LQ96MY1 436 aaPredicted RBP8.25□□□□□ -1.09
SMG6-202ENST00000354901 CDC6Q99741 560 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 PARD6GQ9BYG4 376 aaPredicted RBP8.25□□□□□ -1.09
SMG6-202ENST00000354901 SLC5A7Q9GZV3 580 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 DNAJC4Q9NNZ3 241 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 PARP11Q9NR21 331 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 LUZP4Q9P127 313 aa8.25□□□□□ -1.09
SMG6-202ENST00000354901 IGHV1OR21-1A0A087WYE8 117 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 RAB27BO00194 218 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 BCAT2O15382 392 aaPredicted RBP8.24□□□□□ -1.09
SMG6-202ENST00000354901 DXOO77932 396 aaKnown RBP8.24□□□□□ -1.09
SMG6-202ENST00000354901 AMBPP02760 352 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 CD27P26842 260 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 GALNSP34059 522 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 BIDP55957 195 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 PRSS54Q6PEW0 395 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 C11orf42Q8N5U0 333 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 OR52N4Q8NGI2 321 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 STT3BQ8TCJ2 826 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 ASB13Q8WXK3 278 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 LIPGQ9Y5X9 500 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 LMO7DNF2Z398 122 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 EFSO43281 561 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 CSTBP04080 98 aaKnown RBP8.24□□□□□ -1.09
SMG6-202ENST00000354901 OMGP23515 440 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 MPZP25189 248 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 RAB1AP62820 205 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 RAC1P63000 192 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 CYCSP99999 105 aaKnown RBP8.24□□□□□ -1.09
SMG6-202ENST00000354901 ADGRE4PQ86SQ3 457 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 ZFP62Q8NB50 900 aaPredicted RBP8.24□□□□□ -1.09
SMG6-202ENST00000354901 TMEM37Q8WXS4 190 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 ERGIC1Q969X5 290 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 CNTD2Q9H8S5 307 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 KLRF1Q9NZS2 232 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 FOXJ2Q9P0K8 574 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 R4GMQ9 66 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 ELOA3CA0A087WX78 387 aaPredicted RBP8.24□□□□□ -1.09
SMG6-202ENST00000354901 XKRY2A2RUG3 117 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 FAM221AA4D161 298 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 MS4A18H0YCH9 400 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 NPIPB7O75200 414 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 ZNF735P0CB33 412 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 CDAP32320 146 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 PMELP40967 661 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 WNT5AP41221 380 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 MS4A18Q3C1V0 323 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 C1orf185Q5T7R7 199 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 AWAT2Q6E213 333 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 COX15Q7KZN9 410 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 ZNF429Q86V71 674 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 SLC26A10Q8NG04 563 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 M1APQ8TC57 530 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 HAS2Q92819 552 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 MALSU1Q96EH3 234 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 PI4KAP42356 2102 aa8.24□□□□□ -1.09
SMG6-202ENST00000354901 A0A1W2PNR3 127 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 A0A1W2PR77 199 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 MKRN2OSH3BPM6 223 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 DUS4LO95620 317 aaKnown RBP8.23□□□□□ -1.09
SMG6-202ENST00000354901 IRF2P14316 349 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 MMP16P51512 607 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 DCAF7P61962 342 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 CCL20P78556 96 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 FOXF1Q12946 379 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
SMG6-202ENST00000354901 PLXDC2Q6UX71 529 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 SSX7Q7RTT5 188 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ANGPTL5Q86XS5 388 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 CYB561D1Q8N8Q1 229 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 OR5T1Q8NG75 326 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 FAM122AQ96E09 287 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 GNRHR2Q96P88 292 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ABHD14AQ9BUJ0 271 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 GPR173Q9NS66 373 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 WDFY3Q8IZQ1 3526 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 A0A1B0GX78 115 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 SYT7O43581 403 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 CST2P09228 141 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 FUT3P21217 361 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 SFTPDP35247 375 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 HSF1Q00613 529 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ROM1Q03395 351 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 FAM166AQ6J272 317 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 CLEC18BQ6UXF7 455 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 DNM1P46Q6ZS02 220 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 C1orf87Q8N0U7 546 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 OR2I1PQ8NGU4 316 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 HLA-CQ95604 372 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ADAT3Q96EY9 351 aaPredicted RBP8.23□□□□□ -1.09
SMG6-202ENST00000354901 OR5B2Q96R09 309 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 G6PC2Q9NQR9 355 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 DUX1O43812 170 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 IL18BPO95998 194 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 CYB5R3P00387 301 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms