RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SLC23A3Q6PIS1 610 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 RTN4IP1Q8WWV3 396 aaPredicted RBP16.98■□□□□ 0.31
COL13A1-201ENST00000354547 ERGIC1Q969X5 290 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 PLA2G2EQ9NZK7 142 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 GPR179Q6PRD1 2367 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 CRYM-AS1A6NIL9 109 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 CTSDP07339 412 aaPredicted RBP16.98■□□□□ 0.31
COL13A1-201ENST00000354547 CCL2P13500 99 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 CNN3Q15417 329 aaKnown RBP16.98■□□□□ 0.31
COL13A1-201ENST00000354547 SURF2Q15527 256 aaPredicted RBP16.98■□□□□ 0.31
COL13A1-201ENST00000354547 ESX1Q8N693 406 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 SPSB1Q96BD6 273 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 FOXB1Q99853 325 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 NECAP2Q9NVZ3 263 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 P4HTMQ9NXG6 502 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 DNAJB11Q9UBS4 358 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 DNAJC13O75165 2243 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 AKR1D1P51857 326 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 B3GALT5-AS1P59052 145 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 Q0VFX4 171 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 SPAG16Q8N0X2 631 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 PRRX2Q99811 253 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 KCNIP3Q9Y2W7 256 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 A0A1B0GV50 99 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 GJE1A6NN92 205 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 OR7C1O76099 320 aaPredicted RBP16.97■□□□□ 0.31
COL13A1-201ENST00000354547 ASCL1P50553 236 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 MEX3BQ6ZN04 569 aaKnown RBP16.97■□□□□ 0.31
COL13A1-201ENST00000354547 SKA3Q8IX90 412 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 INTS12Q96CB8 462 aaKnown RBP16.97■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF442Q9H7R0 627 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 SH2D2AQ9NP31 389 aa16.97■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF587BE7ETH6 402 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 TCN2P20062 427 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 GDF1P27539 372 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 AKR1C3P42330 323 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 STK11Q15831 433 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 Q6ZRG5 221 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 GGNQ86UU5 652 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 A0A096LPE4 126 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 A0A1W2PPZ6 126 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 CHATP28329 748 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 TRIM61Q5EBN2 209 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 OSR2Q8N2R0 312 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 GPHA2Q96T91 129 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 DEPPQ9NTK1 212 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF407Q9C0G0 2248 aa16.96■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF716A6NP11 495 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 HSPB6O14558 160 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 DEDDO75618 318 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 RTL6Q6ICC9 239 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 CALHM1Q8IU99 346 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 NRIP2Q9BQI9 281 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 WNT5BQ9H1J7 359 aa16.96■□□□□ 0.3
COL13A1-201ENST00000354547 C9JQL5 133 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 MBPP02686 304 aaPredicted RBP16.95■□□□□ 0.3
COL13A1-201ENST00000354547 SFTA3P0C7M3 94 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 NPBWR2P48146 333 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 RNASEK-C17orf49H0YIS7 233 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 CST2P09228 141 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 OR8U9P0C7N5 309 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 FAM3AP98173 230 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 SWI5Q1ZZU3 235 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 EIF5AL1Q6IS14 154 aaKnown RBP16.95■□□□□ 0.3
COL13A1-201ENST00000354547 ETV3LQ6ZN32 361 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 OR8U1Q8NH10 309 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 OR2H1Q9GZK4 316 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 SLC7A11Q9UPY5 501 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 TIMM10BQ9Y5J6 103 aa16.95■□□□□ 0.3
COL13A1-201ENST00000354547 PINLYPA6NC86 204 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SLC33A1O00400 549 aaPredicted RBP16.94■□□□□ 0.3
COL13A1-201ENST00000354547 IL32P24001 234 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SRD5A2P31213 254 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 CAV2P51636 162 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 CLDN15P56746 228 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SPINK14Q6IE38 97 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SLC25A26Q70HW3 274 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 ZFP82Q8N141 532 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 OR52M1Q8NGK5 317 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 C10orf35Q96D05 121 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SLC2A9Q9NRM0 540 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 PHF1O43189 567 aaPredicted RBP16.94■□□□□ 0.3
COL13A1-201ENST00000354547 NME2P1O60361 137 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SNAPINO95295 136 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 CST4P01036 141 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 RPL35P42766 123 aaKnown RBP16.94■□□□□ 0.3
COL13A1-201ENST00000354547 FHITP49789 147 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 ZNF616Q08AN1 781 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 IL34Q6ZMJ4 242 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 POM121Q96HA1 1249 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SMIM8Q96KF7 97 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SF3B5Q9BWJ5 86 aaKnown RBP16.94■□□□□ 0.3
COL13A1-201ENST00000354547 NAA60Q9H7X0 242 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 AMDHD2Q9Y303 409 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 RRP8O43159 456 aaKnown RBP16.94■□□□□ 0.3
COL13A1-201ENST00000354547 EIF5AP63241 154 aaKnown RBP16.94■□□□□ 0.3
COL13A1-201ENST00000354547 PDZK1IP1Q13113 114 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 PPA1Q15181 289 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 LHFPL2Q6ZUX7 228 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 CPT1CQ8TCG5 803 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms