RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TMEM25Q86YD3 366 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 DYNLRB2Q8TF09 96 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 WNT5BQ9H1J7 359 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 FBXO4Q9UKT5 387 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 PGA4P0DJD7 388 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 PGA5P0DJD9 388 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 EPXP11678 715 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 IGSF21Q96ID5 467 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 THYN1Q9P016 225 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 KIR2DS5A0A0G2JLQ3 304 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 A0A0G2JNG1 304 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 KIR2DS3K7RE56 304 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 OTX1P32242 354 aaPredicted RBP7.23□□□□□ -1.25
SCN8A-201ENST00000354534 B4GALNT1Q00973 533 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 SMAD4Q13485 552 aaKnown RBP7.23□□□□□ -1.25
SCN8A-201ENST00000354534 KIR2DS5Q14953 304 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 ANKRD55Q3KP44 614 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 LHFPL4Q7Z7J7 247 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 KLK11Q9UBX7 282 aa7.23□□□□□ -1.25
SCN8A-201ENST00000354534 N4BP2Q86UW6 1770 aaPredicted RBP7.23□□□□□ -1.25
SCN8A-201ENST00000354534 C7orf71A4D174 169 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TGFAP01135 160 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 POU3F3P20264 500 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 LGALS7P47929 136 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 PSG5Q15238 335 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 MPV17LQ2QL34 196 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TAS1R1Q7RTX1 841 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 LRRC29Q8WV35 223 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 DERL1Q9BUN8 251 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 IL36GQ9NZH8 169 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 POMT2Q9UKY4 750 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 KLRC4-KLRK1H3BQV0 150 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 SPNP16150 400 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 CD81P60033 236 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TEX29Q8N6K0 151 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 KCNE4Q8WWG9 221 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 IGHV3-15A0A0B4J1V0 119 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 FCGR3BO75015 233 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 SNRNP40Q96DI7 357 aaKnown RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TMEM167BQ9NRX6 74 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ZNF840PA6NDX5 716 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 DEFB108AA8MXU0 73 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 AVPR2P30518 371 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 RPL27P61353 136 aaKnown RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TMEM215Q68D42 235 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 KIF26BQ2KJY2 2108 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 A0A1B0GWA3 101 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 PRSS38A1L453 326 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 PPM1DO15297 605 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ADRA1AP35348 466 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 GUCA2AQ02747 115 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 DNAJB12Q9NXW2 375 aaKnown RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TRAV8-2A0A0B4J237 113 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 T-ENOLP0DO92 83 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ERGP11308 486 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 CST5P28325 142 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 SRP14P37108 136 aaKnown RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ZADH2Q8N4Q0 377 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 GBGT1Q8N5D6 347 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 IER2Q9BTL4 223 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TRAF4Q9BUZ4 470 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 LINC00470Q9BZP3 86 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TNFSF11O14788 317 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TSPAN12O95859 305 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 EGR3Q06889 387 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TOE1Q96GM8 510 aaKnown RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 PLEKHB1Q9UF11 243 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ZNF391Q9UJN7 358 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 SPRY3O43610 288 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 FAHP16930 419 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 RNF165Q6ZSG1 346 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 RTN4RL1Q86UN2 441 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 LYG1Q8N1E2 194 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 TMEM229BQ8NBD8 167 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 CSF3RQ99062 836 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 WSB2Q9NYS7 404 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 WRAP73Q9P2S5 460 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 NDRG4Q9ULP0 352 aaKnown RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 SPRY1O43609 319 aaPredicted RBP7.22□□□□□ -1.25
SCN8A-201ENST00000354534 PGA3P0DJD8 388 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 IGFBP7Q16270 282 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 SMIM21Q3B7S5 101 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 COA4Q9NYJ1 87 aa7.22□□□□□ -1.25
SCN8A-201ENST00000354534 ZNF142P52746 1687 aaPredicted RBP7.21□□□□□ -1.25
SCN8A-201ENST00000354534 CXorf65A6NEN9 183 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 SLC35B1P78383 322 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 RUNX3Q13761 415 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 PARS2Q7L3T8 475 aaKnown RBP7.21□□□□□ -1.25
SCN8A-201ENST00000354534 OR4P4Q8NGL7 312 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 UQCR10Q9UDW1 63 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 HCRTR1O43613 425 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 ADAP1O75689 374 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 OR4A8P0C604 315 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 ELAVL1Q15717 326 aaKnown RBP7.21□□□□□ -1.25
SCN8A-201ENST00000354534 SNAI3Q3KNW1 292 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 RTP2Q5QGT7 225 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 R3HDM4Q96D70 268 aa7.21□□□□□ -1.25
SCN8A-201ENST00000354534 C1QTNF3Q9BXJ4 246 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms