RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TMEM9Q9P0T7 183 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 TP53TG5Q9Y2B4 290 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 COL5A1P20908 1838 aaPredicted RBP1.15□□□□□ -2.22
BRCA1-202ENST00000354071 DOCK8Q8NF50 2099 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 MYO3BQ8WXR4 1341 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RAD50Q92878 1312 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 GOLGA8IPA6NC78 632 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 GOLGA8KD6RF30 607 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RCC1P18754 421 aaPredicted RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 PSMB1P20618 241 aaKnown RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 DRD3P35462 400 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SPAM1P38567 509 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 P2RY2P41231 377 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TUFMP49411 452 aaKnown RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 MEOX2P50222 304 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RHOAP61586 193 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TRAM1Q15629 374 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RFX4Q33E94 735 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 UBE2UQ5VVX9 321 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 C8orf74Q6P047 294 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 STRADAQ7RTN6 431 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 PRNTQ86SH4 94 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ENTHD1Q8IYW4 607 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ARIH2OSQ8N7S6 290 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 OR6K6Q8NGW6 343 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RNF138Q8WVD3 245 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM159Q96B96 161 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 OPTNQ96CV9 577 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 C16orf74Q96GX8 76 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM101Q96IK0 257 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CEP19Q96LK0 163 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RILPQ96NA2 401 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CIB1Q99828 191 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TRIM51Q9BSJ1 452 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CDC42EP4Q9H3Q1 356 aaKnown RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RDH14Q9HBH5 336 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 PARVBQ9HBI1 364 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RPS10P5Q9NQ39 176 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SAR1BQ9Y6B6 198 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 HMCN2Q8NDA2 5059 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 F5H5T6 163 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 I3L4J1 428 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CDIPTO14735 213 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 MMP23AO75900 390 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 MPZL1O95297 269 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CD8AP01732 235 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CD3GP09693 182 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 KLK2P20151 261 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ZP3P21754 424 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 HAAOP46952 286 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SLC35A1P78382 337 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CCDC14Q49A88 953 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CTAGE3PQ8IX95 158 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 METTL13Q8N6R0 699 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SUMF2Q8NBJ7 301 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ACTRT1Q8TDG2 376 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CIDECQ96AQ7 238 aaPredicted RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 MBOAT7Q96N66 472 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 DUX3Q96PT4 197 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 NICN1Q9BSH3 213 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 WDR54Q9H977 334 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SLC38A10Q9HBR0 1119 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SLC7A10Q9NS82 523 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 WWOXQ9NZC7 414 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 IL17CQ9P0M4 197 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 UTP11Q9Y3A2 253 aaKnown RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ANKRD30AQ9BXX3 1397 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ELP1O95163 1332 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 EVC2Q86UK5 1308 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 IGKV6D-21A0A0A0MT36 114 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SLC5A10A0PJK1 596 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 J3QT63 122 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 PHOX2AO14813 284 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 HAT1O14929 419 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SPAG7O75391 227 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RP2O75695 350 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF189O75820 626 aaPredicted RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF136P52737 540 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RAB14P61106 215 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 GNB2P62879 340 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 NDPQ00604 133 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 UAP1Q16222 522 aaPredicted RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TIMM23BQ5SRD1 257 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 FRMPD2BQ6IN97 320 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 DAW1Q8N136 415 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 FAM71E2Q8N5Q1 922 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF525Q8N782 197 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CCDC71LQ8N9Z2 235 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 LINC01006Q8NI28 216 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 RGP1Q92546 391 aaPredicted RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 FXYD5Q96DB9 178 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 C8orf76Q96K31 380 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 OLFM3Q96PB7 478 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM243Q9BU79 118 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 SAMD10Q9BYL1 202 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ZDHHC11Q9H8X9 412 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 ABCB9Q9NP78 766 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 HMGXB4Q9UGU5 601 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 PCYOX1Q9UHG3 505 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 FBXL3Q9UKT7 428 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms