RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PGA3P0DJD8 388 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 S100PP25815 95 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 RTL8BQ17RB0 113 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 ZCCHC14Q8WYQ9 949 aaKnown RBP12.01□□□□□ -0.49
SMC6-201ENST00000351948 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 SULT1C2O00338 296 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 GPR37O15354 613 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 GPX8Q8TED1 209 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 EDARADDQ8WWZ3 215 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 PPP1R14DQ9NXH3 145 aa12.01□□□□□ -0.49
SMC6-201ENST00000351948 TTRP02766 147 aa12□□□□□ -0.49
SMC6-201ENST00000351948 KIR3DL2P43630 455 aa12□□□□□ -0.49
SMC6-201ENST00000351948 RPS27AP62979 156 aaKnown RBP12□□□□□ -0.49
SMC6-201ENST00000351948 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
SMC6-201ENST00000351948 C19orf57Q0VDD7 668 aa12□□□□□ -0.49
SMC6-201ENST00000351948 ZNF441Q8N8Z8 693 aa12□□□□□ -0.49
SMC6-201ENST00000351948 COMMD5Q9GZQ3 224 aa12□□□□□ -0.49
SMC6-201ENST00000351948 CHRNA10Q9GZZ6 450 aa12□□□□□ -0.49
SMC6-201ENST00000351948 CXXC4Q9H2H0 198 aa12□□□□□ -0.49
SMC6-201ENST00000351948 DOCK4Q8N1I0 1966 aa12□□□□□ -0.49
SMC6-201ENST00000351948 PCNX1Q96RV3 2341 aa12□□□□□ -0.49
SMC6-201ENST00000351948 BTBD17A6NE02 478 aa12□□□□□ -0.49
SMC6-201ENST00000351948 PNLIPRP3Q17RR3 467 aa12□□□□□ -0.49
SMC6-201ENST00000351948 EIF2S3LQ2VIR3 472 aaKnown RBP12□□□□□ -0.49
SMC6-201ENST00000351948 KIAA1456Q9P272 454 aa12□□□□□ -0.49
SMC6-201ENST00000351948 MPC1Q9Y5U8 109 aa12□□□□□ -0.49
SMC6-201ENST00000351948 OR5H14A6NHG9 310 aa12□□□□□ -0.49
SMC6-201ENST00000351948 OR5B21A6NL26 309 aa12□□□□□ -0.49
SMC6-201ENST00000351948 TLE1Q04724 770 aa12□□□□□ -0.49
SMC6-201ENST00000351948 FAM27BQ5VT28 67 aa12□□□□□ -0.49
SMC6-201ENST00000351948 OR13C8Q8NGS7 320 aa12□□□□□ -0.49
SMC6-201ENST00000351948 HGDQ93099 445 aa12□□□□□ -0.49
SMC6-201ENST00000351948 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
SMC6-201ENST00000351948 EDARQ9UNE0 448 aa12□□□□□ -0.49
SMC6-201ENST00000351948 LMX1BO60663 402 aa12□□□□□ -0.49
SMC6-201ENST00000351948 MMP16P51512 607 aa12□□□□□ -0.49
SMC6-201ENST00000351948 ZNF529Q6P280 563 aa12□□□□□ -0.49
SMC6-201ENST00000351948 OR1S2Q8NGQ3 325 aa12□□□□□ -0.49
SMC6-201ENST00000351948 RPS10P5Q9NQ39 176 aa12□□□□□ -0.49
SMC6-201ENST00000351948 TNFRSF19Q9NS68 423 aa12□□□□□ -0.49
SMC6-201ENST00000351948 SLC39A9Q9NUM3 307 aa12□□□□□ -0.49
SMC6-201ENST00000351948 LIN7CQ9NUP9 197 aaKnown RBP12□□□□□ -0.49
SMC6-201ENST00000351948 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 NCBP2LA6PVI3 153 aaKnown RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 Q3ZCU0 254 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 MRPL14Q6P1L8 145 aaKnown RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 PRR13Q9NZ81 148 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 EFNB2P52799 333 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 ZP4Q12836 540 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 RTP5Q14D33 572 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 OR2W3Q7Z3T1 314 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 MYOZ1Q9NP98 299 aaPredicted RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 FAM212BQ9NTI7 297 aaPredicted RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 SIP14410 1827 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 PNPP00491 289 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 ZNF14P17017 642 aaPredicted RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 HOXA6P31267 233 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 SLC25A30Q5SVS4 291 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 TMEM229BQ8NBD8 167 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 SUMF2Q8NBJ7 301 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 TIMP4Q99727 224 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 MYO7BQ6PIF6 2116 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 ADAM11O75078 769 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 OPN1MWP04001 364 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 OPN1MW2P0DN77 364 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 OPN1MW3P0DN78 364 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 ETV6P41212 452 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 ID4P47928 161 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 SUCLG1P53597 346 aaKnown RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 LYG2Q86SG7 212 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 MRPL22Q9NWU5 206 aaKnown RBP11.99□□□□□ -0.49
SMC6-201ENST00000351948 MTFP1Q9UDX5 166 aa11.99□□□□□ -0.49
SMC6-201ENST00000351948 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
SMC6-201ENST00000351948 ZBTB25P24278 435 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 ASCL1P50553 236 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 IRF3Q14653 427 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 STUMQ69YW2 141 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 INO80CQ6PI98 192 aaPredicted RBP11.98□□□□□ -0.49
SMC6-201ENST00000351948 TPRX1Q8N7U7 411 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 CNTNAP3Q9BZ76 1288 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 ST6GALNAC2Q9UJ37 374 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 A0A1W2PP11 408 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 NME2P1O60361 137 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 SNRNP70P08621 437 aaKnown RBP11.98□□□□□ -0.49
SMC6-201ENST00000351948 TBPP20226 339 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 PSMB6P28072 239 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 GABRA4P48169 554 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 TMUB2Q71RG4 321 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 WDR89Q96FK6 387 aaPredicted RBP11.98□□□□□ -0.49
SMC6-201ENST00000351948 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 TRAF3IP2O43734 574 aaPredicted RBP11.98□□□□□ -0.49
SMC6-201ENST00000351948 FCGR3BO75015 233 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 GALP22466 123 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 ADAMTS17Q8TE56 1095 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 PPP1R1CQ8WVI7 109 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms