RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 NNATQ16517 81 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 TCEAL5Q5H9L2 206 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 TSPO2Q5TGU0 170 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 VN1R4Q7Z5H5 301 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 TGIF2LYQ8IUE0 185 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 MFSD9Q8NBP5 474 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 NUDT10Q8NFP7 164 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 OR10G4Q8NGN3 311 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 BOD1Q96IK1 185 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 CIB3Q96Q77 187 aaPredicted RBP11.61□□□□□ -0.55
IFT88-202ENST00000351808 RNF115Q9Y4L5 304 aa11.61□□□□□ -0.55
IFT88-202ENST00000351808 LINC01553A4QN01 128 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 NKX2-2O95096 273 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 ASAH2BP0C7U1 165 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 FAM3BP58499 235 aaPredicted RBP11.6□□□□□ -0.55
IFT88-202ENST00000351808 TAS2R46P59540 309 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 PSG6Q00889 435 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 IL24Q13007 206 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 SMIM15Q7Z3B0 74 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 Q8NFD4 153 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 OR52R1Q8NGF1 315 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 VPS25Q9BRG1 176 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 Q9Y3F1 56 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 IGKV1D-8A0A087WSZ0 117 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 A0A1W2PN81 502 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 IGSF23A1L1A6 192 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 CCDC85CA6NKD9 419 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 ZNF878C9JN71 531 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 M0QZ24 198 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 OR5G3P0C626 314 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 CHRNA7P36544 502 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 ZNF92Q03936 586 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 TMEM241Q24JQ0 296 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 PRICKLE4Q2TBC4 344 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 ACOT6Q3I5F7 207 aaPredicted RBP11.6□□□□□ -0.55
IFT88-202ENST00000351808 EMC4Q5J8M3 183 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 AGBL5Q8NDL9 886 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 MRGPRDQ8TDS7 321 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 NUDT16L1Q9BRJ7 211 aaKnown RBP11.6□□□□□ -0.55
IFT88-202ENST00000351808 FOXQ1Q9C009 403 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 ZNF665Q9H7R5 613 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 DAPP1Q9UN19 280 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 OR1A2Q9Y585 309 aa11.6□□□□□ -0.55
IFT88-202ENST00000351808 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
IFT88-202ENST00000351808 ZNF205O95201 554 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 DDAH2O95865 285 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 HBE1P02100 147 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 PIGPP57054 158 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 EGR4Q05215 589 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 OR8G2PQ6IF36 304 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 NUP54Q7Z3B4 507 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 NPAS4Q8IUM7 802 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 OR4C3Q8NH37 302 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 TECTBQ96PL2 329 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 RBKSQ9H477 322 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 IL21Q9HBE4 155 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 ZNF319Q9P2F9 582 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 MRPS28Q9Y2Q9 187 aaKnown RBP11.59□□□□□ -0.55
IFT88-202ENST00000351808 ONECUT2O95948 504 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 PEBP1P30086 187 aaKnown RBP11.59□□□□□ -0.55
IFT88-202ENST00000351808 MGAT2Q10469 447 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 UBE2V1Q13404 147 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 GNMTQ14749 295 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 RTP5Q14D33 572 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 DMRTC1Q5HYR2 192 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 DGAT2L6Q6ZPD8 337 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 KMT5CQ86Y97 462 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 FAM160A2Q8N612 972 aaPredicted RBP11.59□□□□□ -0.55
IFT88-202ENST00000351808 SPPL3Q8TCT6 385 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 ORAOV1Q8WV07 137 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 OR5B12Q96R08 314 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 RRAGCQ9HB90 399 aa11.59□□□□□ -0.55
IFT88-202ENST00000351808 ZNF701Q9NV72 531 aaPredicted RBP11.59□□□□□ -0.55
IFT88-202ENST00000351808 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 CCL15-CCL14A0A0B4J2E2 113 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 H7BYZ3 331 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 NRG2O14511 850 aaPredicted RBP11.58□□□□□ -0.56
IFT88-202ENST00000351808 HOXA2O43364 376 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TNFSF12O43508 249 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 CIDEAO60543 219 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 ISG15P05161 165 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 CTSDP07339 412 aaPredicted RBP11.58□□□□□ -0.56
IFT88-202ENST00000351808 CTLA4P16410 223 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 OR3A4PP47883 348 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 CCL15Q16663 113 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TEX43Q6ZNM6 134 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 LINC00346Q8IVM7 164 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 OR5C1Q8NGR4 320 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 DAZLQ92904 295 aaKnown RBP11.58□□□□□ -0.56
IFT88-202ENST00000351808 TOMM40LQ969M1 308 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 VAMP8Q9BV40 100 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms