RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 KCNK7Q9Y2U2 307 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 SMLR1H3BR10 107 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 PYCARD-AS1I3L0S3 204 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 SPRY1O43609 319 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-202ENST00000345734 ANGPTL7O43827 346 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 RAD51DO75771 328 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 NDUFB6O95139 128 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 MELTFP08582 738 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 MGMTP16455 207 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 IGHV1-2P23083 117 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 FAUP35544 74 aaKnown RBP7.95□□□□□ -1.14
ATG4A-202ENST00000345734 ALDH3B1P43353 468 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 RAG2P55895 527 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 TAS2R19P59542 299 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 RPS27AP62979 156 aaKnown RBP7.95□□□□□ -1.14
ATG4A-202ENST00000345734 NHLH1Q02575 133 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 GK2Q14410 553 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-202ENST00000345734 PDCD1Q15116 288 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 GRK1Q15835 563 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF585AQ6P3V2 769 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 Q6ZS92 163 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 MOB3CQ70IA8 216 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 COMMD7Q86VX2 200 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 NAXEQ8NCW5 288 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 OR51T1Q8NGJ9 327 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 PIGCQ92535 297 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 SPSB1Q96BD6 273 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 ARHGAP5-AS1Q96IT6 56 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 GINS4Q9BRT9 223 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 SCNM1Q9BWG6 230 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 ACTR6Q9GZN1 396 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 SHARPINQ9H0F6 387 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 SAV1Q9H4B6 383 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-202ENST00000345734 GLRX2Q9NS18 164 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 STARD10Q9Y365 291 aa7.95□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF850A8MQ14 1090 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 LYZL6O75951 148 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 SCGNO76038 276 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CYB5AP00167 134 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CHRM2P08172 466 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 TMEM225BP0DP42 221 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 RRASP10301 218 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF250P15622 560 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 WNT5AP41221 380 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 KIR2DL2P43627 348 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 PLP2Q04941 152 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 FOXF2Q12947 444 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CNN3Q15417 329 aaKnown RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ACSF3Q4G176 576 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 NKAPLQ5M9Q1 402 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 PLCXD3Q63HM9 321 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 OR52W1Q6IF63 320 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 VWA1Q6PCB0 445 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 MYPOPQ86VE0 399 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 OR11H7Q8NGC8 314 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 OR56B2PQ8NGI1 322 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 RAB3CQ96E17 227 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF75AQ96N20 296 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 NUDT16L1Q9BRJ7 211 aaKnown RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CST11Q9H112 138 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 OR51B6Q9H340 312 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 PTTG3PQ9NZH4 202 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 GHRLQ9UBU3 117 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 GPR160Q9UJ42 338 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 SESN1Q9Y6P5 492 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF816-ZNF321PA0A0X1KG74 233 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 RAB19A4D1S5 217 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 FOXI3A8MTJ6 420 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF736B4DX44 427 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 KRBOX1C9JBD0 128 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 NDUFS6O75380 124 aaKnown RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 RAB3DO95716 219 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CSN2P05814 226 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CELA3BP08861 270 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF735P0CB33 412 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 PF4V1P10720 104 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 HIST1H1DP16402 221 aaKnown RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 CXCL3P19876 107 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 RAB4BP61018 213 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZMYND11Q15326 602 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 MSMPQ1L6U9 139 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 PLEKHN1Q494U1 663 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ELP2Q6IA86 826 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 OVCH2Q7RTZ1 564 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 ZGRF1Q86YA3 2104 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 FAM89BQ8N5H3 189 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 C1orf162Q8NEQ5 155 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 OR56B1Q8NGI3 324 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 APOBEC3DQ96AK3 386 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 BORCS8Q96FH0 119 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 HYLS1Q96M11 299 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 S100A13Q99584 98 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 URM1Q9BTM9 101 aaKnown RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 RANBP3Q9H6Z4 567 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-202ENST00000345734 X6R8D5 127 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 PTPRQQ9UMZ3 2332 aa7.94□□□□□ -1.14
ATG4A-202ENST00000345734 IGKV1-12A0A0C4DH73 117 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 IGKV1D-12P01611 117 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 CD74P04233 296 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms