RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TMEM229BQ8NBD8 167 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ACVR1CQ8NER5 493 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 NOX4Q9NPH5 578 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MRM2Q9UI43 246 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 IGSF23A1L1A6 192 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 UBE2G1P62253 170 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SLC8B1Q6J4K2 584 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 V9GYY9 64 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 KLK3P07288 261 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 NGFRP08138 427 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TRAT1Q6PIZ9 186 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 IL22RA1Q8N6P7 574 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ADCYAP1R1P41586 468 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF678Q5SXM1 525 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM30AQ9NV96 361 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 GALR2O43603 387 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 IFI6P09912 130 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 C1QTNF9P0C862 333 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 WNT16Q9UBV4 365 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CRYBG1Q9Y4K1 1723 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 F8W1H4 67 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 S1PR2O95136 353 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 HPRT1P00492 218 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 LINC00869P0C866 280 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SMIM13P0DJ93 91 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TIMP3P35625 211 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 OR5D13Q8NGL4 314 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MRGPRFQ96AM1 343 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 FAM3DQ96BQ1 224 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 NEIL1Q96FI4 390 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 VN1R3Q9BXE9 311 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RNF167Q9H6Y7 350 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 YAE1D1Q9NRH1 226 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF346Q9UL40 294 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 OR2W1Q9Y3N9 320 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CNOT1A5YKK6 2376 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PLXNB1O43157 2135 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 GFYI3L273 518 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 BCHEP06276 602 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DS2P43631 304 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF79Q15937 498 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 Q5BKY6 102 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ABHD17CQ6PCB6 329 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A44Q96H78 314 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MED13Q9UHV7 2174 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 APOMO95445 188 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 P2RY1P47900 373 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TGFBR3Q03167 851 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF322Q6U7Q0 402 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RTN4RL1Q86UN2 441 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 GLMPQ8WWB7 406 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SPCS1Q9Y6A9 102 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PTGESO14684 152 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CD22P20273 847 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 EVI2AP22794 236 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 GDF1P27539 372 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 NCBP2P52298 156 aaKnown RBP eCLIP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RAC3P60763 192 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 EWSR1Q01844 656 aaKnown RBP eCLIP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ANKRD10Q9NXR5 420 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CCNL1Q9UK58 526 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TIMM8BQ9Y5J9 83 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MED12LQ86YW9 2145 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF253O75346 499 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MPC2O95563 127 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 PLPPR1Q8TBJ4 325 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ASB10Q8WXI3 467 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 PBX4Q9BYU1 374 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MS4A6AQ9H2W1 248 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM38BQ9NVV0 291 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ARSAP15289 507 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 CLRN1P58418 232 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ID2Q02363 134 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MEPCEQ7L2J0 689 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR13H1Q8NG92 308 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM160Q9NX00 188 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 H3BVH4 76 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 NMBRP28336 390 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FABP5Q01469 135 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 DYNLRB2Q8TF09 96 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TFAP2BQ92481 460 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SMIM19Q96E16 107 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BLQ99880 126 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ITSN1Q15811 1721 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MYH4Q9Y623 1939 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV19A0A0A6YYK7 116 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF737O75373 536 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FUT1P19526 365 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 CDKN2AP42771 156 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 YRDCQ86U90 279 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MYH3P11055 1940 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FEZF1A0PJY2 475 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 A1L4Q6 167 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 IGHG4P01861 327 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TRA2BP62995 288 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 GGTLC2Q14390 218 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SLC39A5Q6ZMH5 540 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MRGPREQ86SM8 312 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SPATA25Q9BR10 227 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms