RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CASTOR1Q8WTX7 329 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 RCN3Q96D15 328 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 OR8B4Q96RC9 309 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF426Q9BUY5 554 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 GRPEL1Q9HAV7 217 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 DSCAML1Q8TD84 2053 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 OR7A10O76100 309 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 KIR2DS2P43631 304 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 GPR4P46093 362 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 DSTNP60981 165 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 MEP1BQ16820 701 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 CD300EQ496F6 205 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-201ENST00000340660 SPANXN4Q5MJ08 99 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF613Q6PF04 617 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 DHRS4L2Q6PKH6 230 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF767PQ75MW2 155 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 TRMT10AQ8TBZ6 339 aaKnown RBP8.12□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF286AQ9HBT8 521 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 BCL2L10Q9HD36 194 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 PIGLQ9Y2B2 252 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 POLR1DQ9Y2S0 133 aa8.12□□□□□ -1.11
ATXN3-201ENST00000340660 CHEK2O96017 543 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 TROVE2P10155 538 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATXN3-201ENST00000340660 EDDM3BP56851 147 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 KLF5Q13887 457 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-201ENST00000340660 DIAPH2-AS1Q14236 149 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 GFOD2Q3B7J2 385 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 ALG10Q5BKT4 473 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 UTF1Q5T230 341 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF621Q6ZSS3 439 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 Q8N6K4 173 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 OR2K2Q8NGT1 345 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 NRIP2Q9BQI9 281 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 RNF126Q9BV68 326 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 PNRC2Q9NPJ4 139 aaKnown RBP8.11□□□□□ -1.11
ATXN3-201ENST00000340660 PLSCR3Q9NRY6 295 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 BTNL2Q9UIR0 455 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 DMRT1Q9Y5R6 373 aa8.11□□□□□ -1.11
ATXN3-201ENST00000340660 A0A0G2JLM5 398 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 K7N7A8 449 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 M0R135 149 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 ARPC1BO15143 372 aaKnown RBP8.1□□□□□ -1.11
ATXN3-201ENST00000340660 IFNA10P01566 189 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 CD74P04233 296 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 PEX2P28328 305 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 AQP1P29972 269 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 APOFQ13790 326 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 EBI3Q14213 229 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 RBM39Q14498 530 aaKnown RBP8.1□□□□□ -1.11
ATXN3-201ENST00000340660 RFX4Q33E94 735 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 LELP1Q5T871 98 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 PRAMEF5Q5TYX0 476 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF662Q6ZS27 426 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 OR6V1Q8N148 313 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 TRIML2Q8N7C3 387 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 PFN4Q8NHR9 129 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 MAL2Q969L2 176 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 TOMM40LQ969M1 308 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF799Q96GE5 643 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 PANX1Q96RD7 426 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 MICU1Q9BPX6 476 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
ATXN3-201ENST00000340660 RHBDD3Q9Y3P4 386 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 JRKLQ9Y4A0 524 aa8.1□□□□□ -1.11
ATXN3-201ENST00000340660 A6NIZ1 184 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 TMEM210A6NLX4 147 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 CPSF4LA6NMK7 179 aaKnown RBP8.09□□□□□ -1.11
ATXN3-201ENST00000340660 SOX15O60248 233 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 AMBPP02760 352 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 DDOSTP39656 456 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 TPTEP56180 551 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 RAP1BP61224 184 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 NAA20P61599 178 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 RAP1AP62834 184 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 GALEQ14376 348 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 TAF13Q15543 124 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 LINC00471Q8N535 108 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 LRRC75AQ8NAA5 344 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 RPEQ96AT9 228 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 MCHR1Q99705 422 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 RTL8AQ9BWD3 113 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 PAPOLGQ9BWT3 736 aaKnown RBP8.09□□□□□ -1.11
ATXN3-201ENST00000340660 OR6C3Q9NZP0 311 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 SLC7A7Q9UM01 511 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 TNXBP22105 4242 aa8.09□□□□□ -1.11
ATXN3-201ENST00000340660 KRT75O95678 551 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 EGR2P11161 476 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-201ENST00000340660 SOX6P35712 828 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 CCT5P48643 541 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 SYNJ2BPP57105 145 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 NANOS3P60323 173 aaKnown RBP8.08□□□□□ -1.12
ATXN3-201ENST00000340660 FAM3AP98173 230 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 LINC00596Q86U02 117 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 LINC00346Q8IVM7 164 aa8.08□□□□□ -1.12
ATXN3-201ENST00000340660 TPRX1Q8N7U7 411 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms