RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 OSR2Q8N2R0 312 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 CISD2Q8N5K1 135 aaKnown RBP6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 ZSCAN4Q8NAM6 433 aaPredicted RBP6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 STEAP2Q8NFT2 490 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 OR2AK2Q8NG84 335 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 OR13G1Q8NGZ3 307 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 CASTOR1Q8WTX7 329 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 EMG1Q92979 244 aaKnown RBP6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 WNT2BQ93097 391 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 MARS2Q96GW9 593 aaKnown RBP6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 MED30Q96HR3 178 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 SEC22AQ96IW7 307 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 NUDT16L1Q9BRJ7 211 aaKnown RBP6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 TMEM165Q9HC07 324 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 ATPIF1Q9UII2 106 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 NPTNQ9Y639 398 aa6.34□□□□□ -1.39
SRFBP1-201ENST00000339397 SVEP1Q4LDE5 3571 aa6.34□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5H14A6NHG9 310 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SNRPGP15A8MWD9 76 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 DISC1C4P0D8 188 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 H0YL77 283 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 GFRA3O60609 400 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 WDR1O75083 606 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 CGAP01215 116 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 HLA-AP01891 365 aaKnown RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 NAT1P18440 290 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 CHATP28329 748 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 MPV17P39210 176 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 PRR30Q53SZ7 412 aaPredicted RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 LY6G6FQ5SQ64 297 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 ZDHHC23Q8IYP9 409 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 ASCC1Q8N9N2 400 aaKnown RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 TERB2Q8NHR7 220 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 HYLS1Q96M11 299 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 C5orf66Q9H5L9 145 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 EHFQ9NZC4 300 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SH3BGRL2Q9UJC5 107 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 PKDREJQ9NTG1 2253 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 KCNAB3O43448 404 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SMPD2O60906 423 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SCGNO76038 276 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC22A5O76082 557 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 OR2A4O95047 310 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 TGFBR3Q03167 851 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 PSG7Q13046 419 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 MEF2DQ14814 521 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 NSUN5P2Q63ZY6 315 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF474Q6S9Z5 364 aaPredicted RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 WDR86Q86TI4 376 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 HOGA1Q86XE5 327 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 CCDC54Q8NEL0 328 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC25A40Q8TBP6 338 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 PCNPQ8WW12 178 aaKnown RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 PRRT1Q99946 306 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 GPN1Q9HCN4 374 aaPredicted RBP6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 PLSCR4Q9NRQ2 329 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC2A8Q9NY64 477 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 ANAPC10Q9UM13 185 aa6.33□□□□□ -1.4
SRFBP1-201ENST00000339397 MPTX1A8MV57 137 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 AHRRA9YTQ3 701 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF780AO75290 641 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 GLI4P10075 376 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 ZBTB25P24278 435 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 UCP2P55851 309 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 RBM11P57052 281 aaKnown RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 PPP1CBP62140 327 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 IL13RA1P78552 427 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 PNLIPRP3Q17RR3 467 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OVCH2Q7RTZ1 564 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 SPICQ8N5J4 248 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 Q8NA96 180 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 PXT1Q8NFP0 134 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OR1J1Q8NGS3 322 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5H2Q8NGV7 314 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5P3Q8WZ94 311 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 TMEM230Q96A57 120 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CMSS1Q9BQ75 279 aaKnown RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 RTBDNQ9BSG5 229 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 ALX4Q9H161 411 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 GLRX2Q9NS18 164 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OPN4Q9UHM6 478 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF107Q9UII5 783 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 FBXO9Q9UK97 447 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 SERPINE3A8MV23 424 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CST4P01036 141 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 TFF1P04155 84 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CECR9P0C854 216 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 COX5AP20674 150 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OR3A3P47888 321 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 FABP6P51161 128 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 TBC1D28Q2M2D7 210 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 LRRC37A5PQ49AS3 106 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 C11orf88Q6PI97 169 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 KCTD9Q7L273 389 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC25A42Q86VD7 318 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 FTMTQ8N4E7 242 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 C12orf45Q8N5I9 185 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms