RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 EMG1Q92979 244 aaKnown RBP18.55■□□□□ 0.56
SDC3-202ENST00000339394 C12orf43Q96C57 262 aaKnown RBP18.55■□□□□ 0.56
SDC3-202ENST00000339394 TMEM246Q9BRR3 403 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 NARFLQ9H6Q4 476 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 RHOFQ9HBH0 211 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 HMG20AQ9NP66 347 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 IL36GQ9NZH8 169 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 TANC2Q9HCD6 1990 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 AIPO00170 330 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 ZNF780AO75290 641 aaPredicted RBP18.55■□□□□ 0.56
SDC3-202ENST00000339394 IL1AP01583 271 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 CFPP27918 469 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 RAB11BQ15907 218 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 ELP2Q6IA86 826 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 SFXN4Q6P4A7 337 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 MUC20Q8N307 709 aaPredicted RBP18.55■□□□□ 0.56
SDC3-202ENST00000339394 Q8NFD4 153 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 ISOC1Q96CN7 298 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 BCL7BQ9BQE9 202 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 IL36RNQ9UBH0 155 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 GHRLQ9UBU3 117 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 STEAP1Q9UHE8 339 aa18.55■□□□□ 0.56
SDC3-202ENST00000339394 IGHV4-61A0A0C4DH41 118 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 A0A1W2PP11 408 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 OR2AT4A6NND4 320 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 HTR3BO95264 441 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 GYPAP02724 150 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 PSG2P11465 335 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 PRKACAP17612 351 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 SERPINA2P20848 420 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 P2RY14Q15391 338 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 KCNJ8Q15842 424 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 DGUOKQ16854 277 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 TMEM155Q4W5P6 130 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 NDNFQ8TB73 568 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 GAL3ST1Q99999 423 aa18.54■□□□□ 0.56
SDC3-202ENST00000339394 RBM38Q9H0Z9 239 aaKnown RBP18.54■□□□□ 0.56
SDC3-202ENST00000339394 RFPL4AA6NLU0 287 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 RFPL4AL1F8VTS6 287 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 TNFRSF13BO14836 293 aaPredicted RBP18.53■□□□□ 0.56
SDC3-202ENST00000339394 CSTBP04080 98 aaKnown RBP18.53■□□□□ 0.56
SDC3-202ENST00000339394 SLC2A2P11168 524 aaPredicted RBP18.53■□□□□ 0.56
SDC3-202ENST00000339394 ARSBP15848 533 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 FGF12P61328 243 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 GPR176Q14439 515 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 STUMQ69YW2 141 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 USP43Q70EL4 1123 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 OR51D1Q8NGF3 324 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 ANGPTL6Q8NI99 470 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 DAPK2Q9UIK4 370 aa18.53■□□□□ 0.56
SDC3-202ENST00000339394 IGKV1D-17A0A075B6S4 117 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 CCDC160A6NGH7 325 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 NOL3O60936 208 aaKnown RBP18.52■□□□□ 0.56
SDC3-202ENST00000339394 KNG1P01042 644 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 UBBP0CG47 229 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 VSIG8P0DPA2 414 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 BMXP51813 675 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 SPICQ8N5J4 248 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 TMEM104Q8NE00 496 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 SLC25A46Q96AG3 418 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 FAM3DQ96BQ1 224 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 REG4Q9BYZ8 158 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 DCSTAMPQ9H295 470 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 PCDHB16Q9NRJ7 776 aa18.52■□□□□ 0.56
SDC3-202ENST00000339394 DPPA5A6NC42 116 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 CEACAM18A8MTB9 384 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 RNF223E7ERA6 249 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 H3BMQ9 156 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 NDUFA2O43678 99 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 BPNT1O95861 308 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 TFF1P04155 84 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 GTF2F2P13984 249 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 AMY2BP19961 511 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 DUSP1P28562 367 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 SNU13P55769 128 aaKnown RBP18.51■□□□□ 0.55
SDC3-202ENST00000339394 QRFPP83859 136 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 SPCS2Q15005 226 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 ZNF146Q15072 292 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 C2orf76Q3KRA6 126 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 OR10K2Q6IF99 312 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 DCDC5Q6ZRR9 648 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 OSR2Q8N2R0 312 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 CLDND2Q8NHS1 167 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 FAM46BQ96A09 425 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 KCNK15Q9H427 330 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 LIN7BQ9HAP6 207 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 OR14J1Q9UGF5 321 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 MYO9AB2RTY4 2548 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 A0A096LNT2 108 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 A0A0B4J203 849 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 CRTAPO75718 401 aaPredicted RBP18.51■□□□□ 0.55
SDC3-202ENST00000339394 USF1P22415 310 aaPredicted RBP18.51■□□□□ 0.55
SDC3-202ENST00000339394 SPIN3Q5JUX0 258 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 FIP1L1Q6UN15 594 aaKnown RBP18.51■□□□□ 0.55
SDC3-202ENST00000339394 LYPD2Q6UXB3 125 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 OR51T1Q8NGJ9 327 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 CCL13Q99616 98 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 CST11Q9H112 138 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 BANF2Q9H503 90 aa18.51■□□□□ 0.55
SDC3-202ENST00000339394 ZNF222Q9UK12 451 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms