RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 APOBEC4Q8WW27 367 aaKnown RBP3.67□□□□□ -1.82
NEDD4-201ENST00000338963 TBX5Q99593 518 aa3.67□□□□□ -1.82
NEDD4-201ENST00000338963 SEMA3CQ99985 751 aa3.67□□□□□ -1.82
NEDD4-201ENST00000338963 MS4A6AQ9H2W1 248 aa3.67□□□□□ -1.82
NEDD4-201ENST00000338963 MED29Q9NX70 200 aa3.67□□□□□ -1.82
NEDD4-201ENST00000338963 CRLS1Q9UJA2 301 aa3.67□□□□□ -1.82
NEDD4-201ENST00000338963 GAGE12HA6NDE8 117 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 G3V3Y1 287 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 CLDN1O95832 211 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TBX6O95947 436 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF28P17035 718 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 USF1P22415 310 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 REG1BP48304 166 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GRB2P62993 217 aaKnown RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 FOXL1Q12952 345 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GABRA6Q16445 453 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GCSAMLQ5JQS6 135 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 OR10J3Q5JRS4 329 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 C1QL3Q5VWW1 255 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ERASQ7Z444 233 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TRAPPC6BQ86SZ2 158 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 LINC00346Q8IVM7 164 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 CADM4Q8NFZ8 388 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 OR10V1Q8NGI7 309 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 OR51A4Q8NGJ6 313 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF563Q8TA94 476 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 MRPL30Q8TCC3 161 aaKnown RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 APIPQ96GX9 242 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 STRADBQ9C0K7 418 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GPR132Q9UNW8 380 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 KCPQ6ZWJ8 1503 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 WIPF1O43516 503 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ANGPTL7O43827 346 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ALOX12BO75342 701 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TRAPPC6AO75865 159 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 LIM2P55344 173 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ID2Q02363 134 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 SMAGPQ0VAQ4 97 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ICAM4Q14773 271 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 HLA-DRB5Q30154 266 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 YRDCQ86U90 279 aaKnown RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 SCGB1C1Q8TD33 95 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 C5orf30Q96GV9 206 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GPER1Q99527 375 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 VSIG4Q9Y279 399 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 LIPGQ9Y5X9 500 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 LMO1P25800 156 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 HSPB3Q12988 150 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 IHHQ14623 411 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 P2RY6Q15077 328 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ZBTB34Q8NCN2 500 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 OR2K2Q8NGT1 345 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 MAL2Q969L2 176 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 NEIL2Q969S2 332 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ZBTB45Q96K62 511 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 HCAR1Q9BXC0 346 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 COL25A1Q9BXS0 654 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 EBPLQ9BY08 206 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TFCP2L1Q9NZI6 479 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 HS3ST2Q9Y278 367 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 KIF13BQ9NQT8 1826 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TLX3O43711 291 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF865P0CJ78 1059 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 IL2RBP14784 551 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GRPRP30550 384 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 SLC25A1P53007 311 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 PGGT1BP53609 377 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ABCA11PQ4W5N1 156 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM240Q5SV17 173 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 MORN4Q8NDC4 146 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 GALMQ96C23 342 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 KCNS1Q96KK3 526 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 DGAT2Q96PD7 388 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 CHRDL1Q9BU40 450 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 SMIM3Q9BZL3 60 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 SLC25A18Q9H1K4 315 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 AKIRIN1Q9H9L7 192 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 KLHL13Q9P2N7 655 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 KCNS2Q9ULS6 477 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 BOKQ9UMX3 212 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 YTHDF2Q9Y5A9 579 aaKnown RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 SIRT4Q9Y6E7 314 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 NSG1A0A0A6YYJ2 146 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ANKRD30BLA7E2S9 258 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM229AB2RXF0 380 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 HPNP05981 417 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 LINC00869P0C866 280 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 HIST1H1DP16402 221 aaKnown RBP3.66□□□□□ -1.82
NEDD4-201ENST00000338963 AADACP22760 399 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 FASLGP48023 281 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 BTG2P78543 158 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 ADIGQ0VDE8 80 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 LAMTOR4Q0VGL1 99 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 CSRP2Q16527 193 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 CDCP2Q5VXM1 449 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 AMMECR1LQ6DCA0 310 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 CLDN19Q8N6F1 224 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 OR4D11Q8NGI4 311 aa3.66□□□□□ -1.82
NEDD4-201ENST00000338963 OR13C6PQ8NH95 151 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms