RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR14L1PQ8NHC6 308 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 AKIRIN1Q9H9L7 192 aaPredicted RBP12.4□□□□□ -0.42
PCDH8-201ENST00000338862 SRPK3Q9UPE1 567 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 A0A096LPE4 126 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 IGKV1-9A0A0C4DH69 117 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 A0A1W2PPZ6 126 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 HS3ST1O14792 307 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 ZFAND5O76080 213 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 IAPPP10997 89 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 SLC25A26Q70HW3 274 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 LGI3Q8N145 548 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 C15orf54Q8N8G6 183 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 POC1AQ8NBT0 407 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 OR5C1Q8NGR4 320 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 HPSE2Q8WWQ2 592 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 LIPHQ8WWY8 451 aa12.4□□□□□ -0.42
PCDH8-201ENST00000338862 CARHSP1Q9Y2V2 147 aaKnown RBP12.4□□□□□ -0.42
PCDH8-201ENST00000338862 ANKUB1A6NFN9 424 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 SOX15O60248 233 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 CLN5O75503 358 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 MSR1P21757 451 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 RAB5CP51148 216 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 SMAD4Q13485 552 aaKnown RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 PRRG4Q9BZD6 226 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 SLC35B3Q9H1N7 401 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ZNF286AQ9HBT8 521 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ANXA10Q9UJ72 324 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 AP4M1O00189 453 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 PHOX2AO14813 284 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 SLC34A2O95436 690 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 CFIP05156 583 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 HOXC4P09017 264 aaPredicted RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ACKR3P25106 362 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 EFNA3P52797 238 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 LBX1P52954 281 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 NAAAQ02083 359 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 DEGS2Q6QHC5 323 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 CMTM1Q8IZ96 169 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ARHGEF39Q8N4T4 335 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 RDH5Q92781 318 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 NAT6Q93015 286 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 RARRES3Q9UL19 164 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 EML5Q05BV3 1969 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 TNFSF11O14788 317 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 LDLRAD4O15165 306 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ISG15P05161 165 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 IGLV3-21P80748 117 aaPredicted RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ECH1Q13011 328 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 OR2B11Q5JQS5 317 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 AADACL3Q5VUY0 350 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 OR2T2Q6IF00 324 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 SCGB1C1Q8TD33 95 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
PCDH8-201ENST00000338862 AQP10Q96PS8 301 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
PCDH8-201ENST00000338862 NKX2-6A6NCS4 301 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 FIGNL2A6NMB9 653 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 E9PLN8 166 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 MMP9P14780 707 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 SLC2A9Q9NRM0 540 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 GAB2Q9UQC2 676 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 REV3LO60673 3130 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 FER1L5A0AVI2 2057 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 POLEQ07864 2286 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 IGHV1OR21-1A0A087WYE8 117 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 MSTNO14793 375 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
PCDH8-201ENST00000338862 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 PTRH2Q9Y3E5 179 aaKnown RBP12.38□□□□□ -0.43
PCDH8-201ENST00000338862 A0A087WZY1 265 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 NUDT19A8MXV4 375 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 IFNA5P01569 189 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 CCL20P78556 96 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 TMEM267Q0VDI3 215 aaPredicted RBP12.38□□□□□ -0.43
PCDH8-201ENST00000338862 SNAI3Q3KNW1 292 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 MEGF10Q96KG7 1140 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 DNAJB11Q9UBS4 358 aa12.38□□□□□ -0.43
PCDH8-201ENST00000338862 TP53I11O14683 189 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 ADAM20O43506 726 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 SERPINE2P07093 398 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 RBP2P50120 134 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 MPV17LQ2QL34 196 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 RNF212Q495C1 297 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 ZNF429Q86V71 674 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 GPR61Q9BZJ8 451 aa12.37□□□□□ -0.43
PCDH8-201ENST00000338862 GAR1Q9NY12 217 aaKnown RBP12.37□□□□□ -0.43
PCDH8-201ENST00000338862 ARHGAP21Q5T5U3 1957 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms