RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ATP1B3P54709 279 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 BPIFB3P59826 476 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 SLC34A1Q06495 639 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 CDK5R1Q15078 307 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 ASPHD2Q6ICH7 369 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 C8orf59Q8N0T1 100 aaPredicted RBP12.53□□□□□ -0.4
PRKN-201ENST00000338468 ZNF561Q8N587 486 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 OR13C9Q8NGT0 318 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 GCDHQ92947 438 aaPredicted RBP12.53□□□□□ -0.4
PRKN-201ENST00000338468 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 OPALINQ96PE5 141 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 SPACA5Q96QH8 159 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 C19orf12Q9NSK7 152 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 IL36RNQ9UBH0 155 aa12.53□□□□□ -0.4
PRKN-201ENST00000338468 IGKV1-12A0A0C4DH73 117 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 IRGMA1A4Y4 181 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 ERICH4A6NGS2 130 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 OGG1O15527 345 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 XPNPEP2O43895 674 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 ZNF737O75373 536 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 IGKV1D-12P01611 117 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 PIPP12273 146 aaPredicted RBP12.52□□□□□ -0.41
PRKN-201ENST00000338468 BCL3P20749 454 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 PRTN3P24158 256 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 MTCP1P56278 107 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 PDZK1IP1Q13113 114 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 BAMBIQ13145 260 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 DOC2BQ14184 412 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 ZNF529Q6P280 563 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 RPL22L1Q6P5R6 122 aaKnown RBP12.52□□□□□ -0.41
PRKN-201ENST00000338468 RBMS3Q6XE24 437 aaKnown RBP12.52□□□□□ -0.41
PRKN-201ENST00000338468 LHFPL2Q6ZUX7 228 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 PDZD9Q8IXQ8 264 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 HAVCR2Q8TDQ0 301 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 RFT1Q96AA3 541 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 TMEM80Q96HE8 168 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 SIRT7Q9NRC8 400 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.41
PRKN-201ENST00000338468 OR14J1Q9UGF5 321 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 PSORS1C1Q9UIG5 152 aa12.52□□□□□ -0.41
PRKN-201ENST00000338468 EXOSC1Q9Y3B2 195 aaKnown RBP12.52□□□□□ -0.41
PRKN-201ENST00000338468 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 CLDN34H7C241 214 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 M0R1W7 72 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 SLC1A7O00341 560 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 ALX3O95076 343 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 TK1P04183 234 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 POU3F4P49335 361 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 CAPZA1P52907 286 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 COL10A1Q03692 680 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 ST3GAL4Q11206 333 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 KLRD1Q13241 179 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 CCDC58Q4VC31 144 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
PRKN-201ENST00000338468 TMPRSS11AQ6ZMR5 421 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 C1orf122Q6ZSJ8 110 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 OR52N1Q8NH53 320 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 GATAD2BQ8WXI9 593 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
PRKN-201ENST00000338468 PLCXD1Q9NUJ7 323 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 FKBP14Q9NWM8 211 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 BABAM2Q9NXR7 383 aa12.51□□□□□ -0.41
PRKN-201ENST00000338468 A0A1W2PQ09 198 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 TMEM89A2RUT3 159 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 K7N7A8 449 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 ANGPTL7O43827 346 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 RPSAP08865 295 aaKnown RBP12.5□□□□□ -0.41
PRKN-201ENST00000338468 MYL12AP19105 171 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 AQP4P55087 323 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 TMEM200BQ69YZ2 307 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 SERPINA12Q8IW75 414 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 CMTM4Q8IZR5 234 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 FAM185AQ8N0U4 392 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 OR4M1Q8NGD0 313 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 OR51A2Q8NGJ7 313 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 EMG1Q92979 244 aaKnown RBP12.5□□□□□ -0.41
PRKN-201ENST00000338468 FAM234AQ9H0X4 552 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 SEBOXQ9HB31 216 aaPredicted RBP12.5□□□□□ -0.41
PRKN-201ENST00000338468 CNOT2Q9NZN8 540 aaKnown RBP12.5□□□□□ -0.41
PRKN-201ENST00000338468 DHDHQ9UQ10 334 aa12.5□□□□□ -0.41
PRKN-201ENST00000338468 A0A0U1RQK1 487 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
PRKN-201ENST00000338468 SULT1B1O43704 296 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 KDM4BO94953 1096 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 RNASE1P07998 156 aaKnown RBP12.49□□□□□ -0.41
PRKN-201ENST00000338468 CHRM2P08172 466 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 CALCBP10092 127 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 C21orf33P30042 268 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms