RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 GGNBP1Q5YKI7 109 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 ZNF442Q9H7R0 627 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 FOXJ2Q9P0K8 574 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 A0A1B0GW55 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 GJE1A6NN92 205 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 F8VVB4 439 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 F8VWA3 439 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 FARS2O95363 451 aaKnown RBP12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4L2P0CJ85 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4L3P0CJ86 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4L4P0CJ87 422 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4L5P0CJ88 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4L6P0CJ89 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4L7P0CJ90 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 ZNF708P17019 499 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 CYCSP99999 105 aaKnown RBP12.86□□□□□ -0.35
UBA1-201ENST00000335972 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 C6orf15Q6UXA7 325 aaPredicted RBP12.86□□□□□ -0.35
UBA1-201ENST00000335972 Q6ZPA2 131 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 CBLN2Q8IUK8 224 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 LDAHQ9H6V9 325 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 DUX4Q9UBX2 424 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 SVILO95425 2214 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 FCGR3AP08637 254 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 JMJD7P0C870 316 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 MEX3BQ6ZN04 569 aaKnown RBP12.86□□□□□ -0.35
UBA1-201ENST00000335972 SGPP2Q8IWX5 399 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 OR4A4PQ8NGN8 299 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 FNDC9Q8TBE3 224 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 SCGB3A2Q96PL1 93 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 SLC7A10Q9NS82 523 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 GHRLQ9UBU3 117 aa12.86□□□□□ -0.35
UBA1-201ENST00000335972 NXPH3O95157 252 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 ARF1P84077 181 aaKnown RBP12.85□□□□□ -0.35
UBA1-201ENST00000335972 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 PUSL1Q8N0Z8 303 aaKnown RBP12.85□□□□□ -0.35
UBA1-201ENST00000335972 LHFPL5Q8TAF8 219 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 PSMF1Q92530 271 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 TIMM10BQ9Y5J6 103 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 ZNF503-AS2A6NEH8 195 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 F8W036 122 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 TOR1AO14656 332 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 BLOC1S1P78537 153 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 IGSF11Q5DX21 431 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 NKX6-2Q9C056 277 aaPredicted RBP12.85□□□□□ -0.35
UBA1-201ENST00000335972 NOSIPQ9Y314 301 aaKnown RBP12.85□□□□□ -0.35
UBA1-201ENST00000335972 CST2P09228 141 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 ALDH3B1P43353 468 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
UBA1-201ENST00000335972 PDSS1Q5T2R2 415 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
UBA1-201ENST00000335972 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
UBA1-201ENST00000335972 OR6C6A6NF89 314 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 CEACAM18A8MTB9 384 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 MED6O75586 246 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 APOC1P02654 83 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 ZNF728P0DKX0 622 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 CD79AP11912 226 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 OSR2Q8N2R0 312 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 CPT1CQ8TCG5 803 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 ERGIC1Q969X5 290 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 ADGRG7Q96K78 797 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 TLNRD1Q9H1K6 362 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBA1-201ENST00000335972 CNOT1A5YKK6 2376 aaKnown RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 TMEM218A2RU14 115 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 C5orf49A4QMS7 147 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 MRPL33O75394 65 aaKnown RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 HKR1P10072 659 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 ITGA3P26006 1051 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 CHATP28329 748 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 MAGEA5P43359 124 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 LPAR6P43657 344 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 TRA2AQ13595 282 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBA1-201ENST00000335972 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 DEFB123Q8N688 67 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 RTN4IP1Q8WWV3 396 aaPredicted RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 PHYHIPLQ96FC7 376 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 ZNF488Q96MN9 340 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 FBXL17Q9UF56 701 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 SPENQ96T58 3664 aaKnown RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 A0A1W2PNU3 283 aaPredicted RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 FAM157CP0CG43 387 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 RPL12P30050 165 aaKnown RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 ZNF611Q8N823 705 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 OR56B2PQ8NGI1 322 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 SF3B5Q9BWJ5 86 aaKnown RBP12.84□□□□□ -0.35
UBA1-201ENST00000335972 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 C1orf123Q9NWV4 160 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms