RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 OSR2Q8N2R0 312 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 NEU4Q8WWR8 484 aaPredicted RBP18.09■□□□□ 0.49
TPM1-204ENST00000334895 YIPF5Q969M3 257 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 NICN1Q9BSH3 213 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 SELENOIQ9C0D9 397 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 ABCG5Q9H222 651 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 HMG20AQ9NP66 347 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 RNF7Q9UBF6 113 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 PEX16Q9Y5Y5 336 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 IGHV1-69-2A0A0G2JMI3 117 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 LYNX1G3V0Z9 82 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 APOA1P02647 267 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 LYNX1P0DP58 116 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 GTF2F2P13984 249 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 COL8A2P25067 703 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 TNFSF8P32971 234 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 ART1P52961 327 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 ZNF181Q2M3W8 571 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 FAM201AQ5SY85 155 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 FAM58AQ8N1B3 248 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 EMG1Q92979 244 aaKnown RBP18.09■□□□□ 0.49
TPM1-204ENST00000334895 Q96M66 194 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 CMTM3Q96MX0 182 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 WDFY2Q96P53 400 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 TM2D1Q9BX74 207 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 ZNF581Q9P0T4 197 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 PRKACAP17612 351 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 Q8IYB0 196 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 OR51T1Q8NGJ9 327 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 OR11L1Q8NGX0 322 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 CCL17Q92583 94 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 RHOFQ9HBH0 211 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 TMEM106BQ9NUM4 274 aa18.08■□□□□ 0.48
TPM1-204ENST00000334895 POLQO75417 2590 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 RP2O75695 350 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 NXPH2O95156 264 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 GLRA1P23415 457 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 SNU13P55769 128 aaKnown RBP18.07■□□□□ 0.48
TPM1-204ENST00000334895 RBM11P57052 281 aaKnown RBP18.07■□□□□ 0.48
TPM1-204ENST00000334895 MOGAT2Q3SYC2 334 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 NHLRC3Q5JS37 347 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 ACP7Q6ZNF0 438 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 LRRC28Q86X40 367 aaPredicted RBP18.07■□□□□ 0.48
TPM1-204ENST00000334895 FAM89BQ8N5H3 189 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 DTX3Q8N9I9 347 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 BOLLQ8N9W6 283 aaKnown RBP18.07■□□□□ 0.48
TPM1-204ENST00000334895 C19orf18Q8NEA5 215 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 MRPS24Q96EL2 167 aaKnown RBP18.07■□□□□ 0.48
TPM1-204ENST00000334895 CYYR1Q96J86 154 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 ST3GAL6Q9Y274 331 aa18.07■□□□□ 0.48
TPM1-204ENST00000334895 ANKRD17O75179 2603 aaKnown RBP18.06■□□□□ 0.48
TPM1-204ENST00000334895 TMEM178BH3BS89 294 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 CD80P33681 288 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 S100A5P33763 92 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 CNIH2Q6PI25 160 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 RTN4RL2Q86UN3 420 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 OR4M1Q8NGD0 313 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 HPS1Q92902 700 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 ATG5Q9H1Y0 275 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 PCDHB16Q9NRJ7 776 aa18.06■□□□□ 0.48
TPM1-204ENST00000334895 FOXI3A8MTJ6 420 aaPredicted RBP18.05■□□□□ 0.48
TPM1-204ENST00000334895 RAB27BO00194 218 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 GEMIN2O14893 280 aaKnown RBP18.05■□□□□ 0.48
TPM1-204ENST00000334895 ZNF205O95201 554 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 F12P00748 615 aaPredicted RBP18.05■□□□□ 0.48
TPM1-204ENST00000334895 DUSP1P28562 367 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 MADCAM1Q13477 382 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 PDCD1Q15116 288 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 TAF9Q16594 264 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 CCDC190Q86UF4 302 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 RAB40AQ8WXH6 277 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 RDH5Q92781 318 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 CXorf56Q9H5V9 222 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 NPTNQ9Y639 398 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 IGHV3OR15-7A0A075B7D8 119 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 LRRC30A6NM36 301 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 FAM25AB3EWG3 89 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 FAM25CB3EWG5 89 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 FAM25GB3EWG6 89 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 IRF2P14316 349 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 DAOP14920 347 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 CDK2P24941 298 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 VEGFCP49767 419 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 EFNA4P52798 201 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 MRPS11P82912 194 aaKnown RBP18.05■□□□□ 0.48
TPM1-204ENST00000334895 LSAMPQ13449 338 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 HFEQ30201 348 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 SIGIRRQ6IA17 410 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 LINC00299Q6ZSB3 139 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 IZUMO1Q8IYV9 350 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 DIRAS2Q96HU8 199 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 URM1Q9BTM9 101 aaKnown RBP18.05■□□□□ 0.48
TPM1-204ENST00000334895 RASL12Q9NYN1 266 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 EXTL2Q9UBQ6 330 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 EDARQ9UNE0 448 aa18.05■□□□□ 0.48
TPM1-204ENST00000334895 SOCS1O15524 211 aa18.04■□□□□ 0.48
TPM1-204ENST00000334895 IGHV4-39P01824 125 aa18.04■□□□□ 0.48
TPM1-204ENST00000334895 CPT2P23786 658 aa18.04■□□□□ 0.48
TPM1-204ENST00000334895 GABRR1P24046 479 aa18.04■□□□□ 0.48
TPM1-204ENST00000334895 ZNF146Q15072 292 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms