RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 LSM5Q9Y4Y9 91 aaKnown RBP20.28■□□□□ 0.84
NDEL1-201ENST00000334527 SKA3Q8IX90 412 aa20.28■□□□□ 0.84
NDEL1-201ENST00000334527 BCO1Q9HAY6 547 aa20.28■□□□□ 0.84
NDEL1-201ENST00000334527 DEPPQ9NTK1 212 aa20.28■□□□□ 0.84
NDEL1-201ENST00000334527 SCGB1D2O95969 90 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 GDF1P27539 372 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 CLDN15P56746 228 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 FXYD4P59646 89 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 PCBD1P61457 104 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 SP6Q3SY56 376 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 ABCA11PQ4W5N1 156 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 ACER2Q5QJU3 275 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 C10orf91Q5T1B1 145 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 LDLRAD3Q86YD5 345 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 OR5T2Q8NGG2 359 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 TLNRD1Q9H1K6 362 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 RGCCQ9H4X1 137 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 SLC7A11Q9UPY5 501 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 ST3GAL6Q9Y274 331 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 KCNIP3Q9Y2W7 256 aa20.27■□□□□ 0.84
NDEL1-201ENST00000334527 F10P00742 488 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 FCGR2CP31995 323 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 FUT6P51993 359 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 PDZK1IP1Q13113 114 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 RIPPLY2Q5TAB7 128 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 PLCXD3Q63HM9 321 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 TMEM88Q6PEY1 159 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 SLC22A25Q6T423 547 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF100Q8IYN0 542 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 ABHD3Q8WU67 409 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 PRRX2Q99811 253 aa20.27■□□□□ 0.83
NDEL1-201ENST00000334527 CARHSP1Q9Y2V2 147 aaKnown RBP20.27■□□□□ 0.83
NDEL1-201ENST00000334527 MED6O75586 246 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 CST4P01036 141 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 TCN2P20062 427 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 NME2P22392 152 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 DCAF12Q5T6F0 453 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 H3F3CQ6NXT2 135 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 PIGCQ92535 297 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF845Q96IR2 970 aaPredicted RBP20.26■□□□□ 0.83
NDEL1-201ENST00000334527 NAA60Q9H7X0 242 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 UQCC1Q9NVA1 299 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 FBXL17Q9UF56 701 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 FREM2Q5SZK8 3169 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 LAMTOR5O43504 91 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 OR5AC1P0C628 307 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 LPAR6P43657 344 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 PDCD1Q15116 288 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF528Q3MIS6 628 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 RTN4IP1Q8WWV3 396 aaPredicted RBP20.26■□□□□ 0.83
NDEL1-201ENST00000334527 RHOFQ9HBH0 211 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 FAM96BQ9Y3D0 163 aa20.26■□□□□ 0.83
NDEL1-201ENST00000334527 B4E171 279 aa20.25■□□□□ 0.83
NDEL1-201ENST00000334527 TSPAN7P41732 249 aa20.25■□□□□ 0.83
NDEL1-201ENST00000334527 IL36GQ9NZH8 169 aa20.25■□□□□ 0.83
NDEL1-201ENST00000334527 ARID1AO14497 2285 aa20.25■□□□□ 0.83
NDEL1-201ENST00000334527 PINLYPA6NC86 204 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 FBXO24O75426 580 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 F12P00748 615 aaPredicted RBP20.24■□□□□ 0.83
NDEL1-201ENST00000334527 TMEM187Q14656 261 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 PHLDA2Q53GA4 152 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 TSPO2Q5TGU0 170 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 CDX2Q99626 313 aaPredicted RBP20.24■□□□□ 0.83
NDEL1-201ENST00000334527 SMIM3Q9BZL3 60 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 IGHV3-9P01782 118 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 EDN3P14138 238 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 CYB561P49447 251 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 CAV2P51636 162 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 TMEM33P57088 247 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 OR8B8Q15620 311 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 TMEM268Q5VZI3 342 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 HAGHLQ6PII5 290 aaPredicted RBP20.24■□□□□ 0.83
NDEL1-201ENST00000334527 CT55Q8WUE5 264 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF286AQ9HBT8 521 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 AMDHD2Q9Y303 409 aa20.24■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF816-ZNF321PA0A0X1KG74 233 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 CYTIPO60759 359 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 CPNE4Q96A23 557 aaPredicted RBP20.23■□□□□ 0.83
NDEL1-201ENST00000334527 SEC11CQ9BY50 192 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF587BE7ETH6 402 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 PDCD6O75340 191 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 MUC1P15941 1255 aaPredicted RBP20.23■□□□□ 0.83
NDEL1-201ENST00000334527 SULT1A2P50226 295 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 MALLQ13021 153 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 GALNT14Q96FL9 552 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 PRDM6Q9NQX0 595 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 SLC2A9Q9NRM0 540 aa20.23■□□□□ 0.83
NDEL1-201ENST00000334527 JTBO76095 146 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 MBPP02686 304 aaPredicted RBP20.22■□□□□ 0.83
NDEL1-201ENST00000334527 MMP7P09237 267 aaPredicted RBP20.22■□□□□ 0.83
NDEL1-201ENST00000334527 C6orf15Q6UXA7 325 aaPredicted RBP20.22■□□□□ 0.83
NDEL1-201ENST00000334527 CBLN2Q8IUK8 224 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 OR5L1Q8NGL2 311 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 XRCC2O43543 280 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 FARS2O95363 451 aaKnown RBP20.22■□□□□ 0.83
NDEL1-201ENST00000334527 GAPDHP04406 335 aaKnown RBP20.22■□□□□ 0.83
NDEL1-201ENST00000334527 GLI4P10075 376 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 GFRA1P56159 465 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 RBM11P57052 281 aaKnown RBP20.22■□□□□ 0.83
NDEL1-201ENST00000334527 TIPARPQ7Z3E1 657 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms