RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MMP16P51512 607 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 HLXQ14774 488 aaPredicted RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 CADM3Q8N126 398 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 TMEM171Q8WVE6 324 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZNF75AQ96N20 296 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ADAM19Q9H013 955 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
C9orf47-201ENST00000334490 A0A1B0GUH1 482 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 A0A1W2PRD5 423 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 A0A1W2PRF3 423 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 A0A1W2PRM7 423 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 IFI6P09912 130 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 RTP5Q14D33 572 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 OR2J1Q9GZK6 312 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 AKIP1Q9NQ31 210 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 IGLV3-21P80748 117 aaPredicted RBP13.19□□□□□ -0.3
C9orf47-201ENST00000334490 TRAT1Q6PIZ9 186 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 CORO2AQ92828 525 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 RNF7Q9UBF6 113 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 KCNE5Q9UJ90 142 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 CCDC88CQ9P219 2028 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 CRYM-AS1A6NIL9 109 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 CRYBA1P05813 215 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 ZNF574Q6ZN55 896 aaPredicted RBP13.19□□□□□ -0.3
C9orf47-201ENST00000334490 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 GLCCI1Q86VQ1 547 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 ERGIC1Q969X5 290 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 C2orf50Q96LR7 162 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 SNRPGP15A8MWD9 76 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 CSRP3P50461 194 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 LIMK1P53667 647 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 TMPRSS13Q9BYE2 586 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 PSENENQ9NZ42 101 aa13.19□□□□□ -0.3
C9orf47-201ENST00000334490 FCGR3BO75015 233 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 IGKV3-11P04433 115 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 DTYMKP23919 212 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 Q3ZCU0 254 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 OR52B4Q8NGK2 314 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 MTFP1Q9UDX5 166 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 PSME4Q14997 1843 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 E5RGE8 158 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 H3BP45 60 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 PYCARD-AS1I3L0S3 204 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 RPL12P30050 165 aaKnown RBP13.18□□□□□ -0.3
C9orf47-201ENST00000334490 SCAND1P57086 179 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 SLC25A30Q5SVS4 291 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 FHL5Q5TD97 284 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 C10orf35Q96D05 121 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 ZFC3H1O60293 1989 aaKnown RBP13.18□□□□□ -0.3
C9orf47-201ENST00000334490 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 GMDSO60547 372 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 UBE2KP61086 200 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 TMEM230Q96A57 120 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 SCNM1Q9BWG6 230 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 SLC52A3Q9NQ40 469 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 J3QT63 122 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 HRASP01112 189 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 TRAPPC2P0DI81 140 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 TRAPPC2BP0DI82 140 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 SOHLH1Q5JUK2 328 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 SLC7A5P1Q8MH63 180 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 WNT2BQ93097 391 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
C9orf47-201ENST00000334490 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 GCM2O75603 506 aaPredicted RBP13.17□□□□□ -0.3
C9orf47-201ENST00000334490 PCMT1P22061 227 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 PRRX1P54821 245 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 CDH26Q8IXH8 852 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 POM121L2Q96KW2 1035 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 KCNK15Q9H427 330 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 PURGQ9UJV8 347 aaKnown RBP13.17□□□□□ -0.3
C9orf47-201ENST00000334490 OR2F2O95006 317 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 PSMB3P49720 205 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 RAB7AP51149 207 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 FAM74A1Q5RGS3 127 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 SSX8Q7RTT4 187 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 C1orf196B1AJZ1 125 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 K7EQM0 130 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 JTBO76095 146 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 MGAT2Q10469 447 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 ACOT7LQ6ZUV0 252 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 A0A0G2JMZ2 1700 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 LRRC37A2A6NM11 1700 aa13.17□□□□□ -0.3
C9orf47-201ENST00000334490 SNAPINO95295 136 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 S100A12P80511 92 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 PSG4Q00888 419 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 OR2F1Q13607 317 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 MED30Q96HR3 178 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 WFDC6Q9BQY6 131 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms