RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KCNMB1Q16558 191 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 CD300EQ496F6 205 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 C17orf99Q6UX52 265 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SPRED2Q7Z698 418 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 FBXO16Q8IX29 292 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 EMG1Q92979 244 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PDZD7Q9H5P4 517 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PARP11Q9NR21 331 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 ENGP17813 658 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC25A35Q3KQZ1 300 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PLA1AQ53H76 456 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 ASPHD2Q6ICH7 369 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 C11orf87Q6NUJ2 197 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 OSTM1Q86WC4 334 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 MRPL43Q8N983 215 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR10D3Q8NH80 312 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 CYP2W1Q8TAV3 490 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 ALG3Q92685 438 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 DIO2Q92813 273 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 DLX4Q92988 240 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 DEFB118Q96PH6 123 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 RTP3Q9BQQ7 232 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 NEURL2Q9BR09 285 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 BOCQ9BWV1 1114 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC23A1Q9UHI7 598 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PLIN4Q96Q06 1357 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBFOX3A6NFN3 312 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 IL2RGP31785 369 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 MPV17LQ2QL34 196 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 MRM1Q6IN84 353 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPP1R27Q86WC6 154 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 MRGPRX2Q96LB1 330 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 UBE2E2Q96LR5 201 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF300Q96RE9 604 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 MARVELD1Q9BSK0 173 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 LMO7Q8WWI1 1683 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TRBV23OR9-2A0A075B6M9 112 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 UBE2CO00762 179 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 SCIMPQ6UWF3 145 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR10G3Q8NGC4 313 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 THEM6Q8WUY1 208 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 CES1P1Q9UKY3 287 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 WNT9AO14904 365 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 NAPSAO96009 420 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 HRH1P35367 487 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 CLDN18P56856 261 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PNLIPRP3Q17RR3 467 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 CD99L2Q8TCZ2 262 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 RPS4Y2Q8TD47 263 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 OVCA2Q8WZ82 227 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 MRC1P22897 1456 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 DOCK2Q92608 1830 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TRAV2A0A0B4J234 112 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 LOC107986453A0A1B0GWG9 222 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPP6CO00743 305 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 GDNFP39905 211 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZDHHC14Q8IZN3 488 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR2L13Q8N349 312 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 NUBPLQ8TB37 319 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR2V2Q96R30 315 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM106BQ9NUM4 274 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 Q9Y3F1 56 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TCRBV3S1A0A5B6 114 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 EFSO43281 561 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PF4P02776 101 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ACYP1P07311 99 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PLAURQ03405 335 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ARL14EPQ8N8R7 260 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 MDGA1Q8NFP4 955 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR8B12Q8NGG6 310 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 FAM136AQ96C01 138 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TRIB3Q96RU7 358 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 GPR21Q99679 349 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 CDCA4Q9BXL8 241 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 C2orf42Q9NWW7 574 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF107Q9UII5 783 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 YIPF1Q9Y548 306 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 LRRK1Q38SD2 2015 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 NFAT5O94916 1531 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM238C9JI98 176 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM250H0YL14 139 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PRTN3P24158 256 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 LHX1P48742 406 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 SUOXP51687 545 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 CTAG1AP78358 180 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 IGFBP7Q16270 282 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TIFABQ6ZNK6 161 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR1K1Q8NGR3 316 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ARRDC3Q96B67 414 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 DDIT4LQ96D03 193 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM167BQ9NRX6 74 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 NECAP2Q9NVZ3 263 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ONECUT1Q9UBC0 465 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 SYNGR2O43760 224 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 TIMM8AO60220 97 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 P01737 135 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 DCTP40126 519 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 PTGIRP43119 386 aa5.45□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF140P52738 457 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms