RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CD79AP11912 226 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 CHATP28329 748 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 RBMXP38159 391 aaKnown RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 PDZK1IP1Q13113 114 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 OSR2Q8N2R0 312 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 C10orf35Q96D05 121 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 PAPOLGQ9BWT3 736 aaKnown RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 SHARPINQ9H0F6 387 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 PCNX2A6NKB5 2137 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 SPENQ96T58 3664 aaKnown RBP16.37■□□□□ 0.21
RFTN1-201ENST00000334133 IFNA2P01563 188 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 ATF4P18848 351 aaPredicted RBP16.37■□□□□ 0.21
RFTN1-201ENST00000334133 LHX2P50458 406 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 CYCSP99999 105 aaKnown RBP16.37■□□□□ 0.21
RFTN1-201ENST00000334133 PLGLB1Q02325 96 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 RBM39Q14498 530 aaKnown RBP16.37■□□□□ 0.21
RFTN1-201ENST00000334133 SPERTQ8NA61 448 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 OR56B2PQ8NGI1 322 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 MRPL24Q96A35 216 aaKnown RBP16.37■□□□□ 0.21
RFTN1-201ENST00000334133 CYTL1Q9NRR1 136 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 SLC7A11Q9UPY5 501 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 LAMA5O15230 3695 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 PIGPP57054 158 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 AIMP2Q13155 320 aaKnown RBP16.37■□□□□ 0.21
RFTN1-201ENST00000334133 DCAF10Q5QP82 559 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 OR2A2Q6IF42 318 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 Q6ZPA2 131 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 ZNF611Q8N823 705 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 C2orf50Q96LR7 162 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 TTTY12Q9BZ98 90 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 SMIM3Q9BZL3 60 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 SPRY4Q9C004 299 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 IL36RNQ9UBH0 155 aa16.37■□□□□ 0.21
RFTN1-201ENST00000334133 F8VVB4 439 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 F8VWA3 439 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 SP9P0CG40 484 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 DUSP1P28562 367 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 LHFPL2Q6ZUX7 228 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 POC1AQ8NBT0 407 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 OR11L1Q8NGX0 322 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 FAM173AQ9BQD7 235 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 ZNF442Q9H7R0 627 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 NGFP01138 241 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 RCC1P18754 421 aaPredicted RBP16.36■□□□□ 0.21
RFTN1-201ENST00000334133 CLDN18P56856 261 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 PCBD1P61457 104 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 C12orf49Q9H741 205 aa16.36■□□□□ 0.21
RFTN1-201ENST00000334133 LSM5Q9Y4Y9 91 aaKnown RBP16.36■□□□□ 0.21
RFTN1-201ENST00000334133 CNOT1A5YKK6 2376 aaKnown RBP16.36■□□□□ 0.21
RFTN1-201ENST00000334133 CD59P13987 128 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 FCGR2CP31995 323 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 RIPPLY2Q5TAB7 128 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 PRSS54Q6PEW0 395 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 DBX2Q6ZNG2 339 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 SGPP2Q8IWX5 399 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 BAP18Q8IXM2 172 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 TMEM251Q8N6I4 163 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 OR5L1Q8NGL2 311 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 GPHA2Q96T91 129 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 FAM117AQ9C073 453 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 TMEM231Q9H6L2 316 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 DMXL1Q9Y485 3027 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 SRSF3P84103 164 aaKnown RBP16.35■□□□□ 0.21
RFTN1-201ENST00000334133 TMEM42Q69YG0 159 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 SLAMF9Q96A28 289 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 GPM6AP51674 278 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 OR5T2Q8NGG2 359 aa16.35■□□□□ 0.21
RFTN1-201ENST00000334133 NBEAQ8NFP9 2946 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 ZNF816-ZNF321PA0A0X1KG74 233 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 CDX4O14627 284 aaPredicted RBP16.34■□□□□ 0.21
RFTN1-201ENST00000334133 TPT1P13693 172 aaKnown RBP16.34■□□□□ 0.21
RFTN1-201ENST00000334133 FUT6P51993 359 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 TMEM164Q5U3C3 297 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 TRBV6-7A0A0A0MS04 114 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 OR5AC1P0C628 307 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 EIF3IQ13347 325 aaKnown RBP16.34■□□□□ 0.21
RFTN1-201ENST00000334133 TGIF1Q15583 401 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 KRTAP27-1Q3LI81 207 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 RPL7L1Q6DKI1 246 aaKnown RBP16.34■□□□□ 0.21
RFTN1-201ENST00000334133 FGF23Q9GZV9 251 aaPredicted RBP16.34■□□□□ 0.21
RFTN1-201ENST00000334133 NECAP2Q9NVZ3 263 aa16.34■□□□□ 0.21
RFTN1-201ENST00000334133 ZNF728P0DKX0 622 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 HAAOP46952 286 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 SPEM2Q0P670 501 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 ARL6IP1Q15041 203 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 ABCA11PQ4W5N1 156 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 IGSF11Q5DX21 431 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 PDSS1Q5T2R2 415 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 GGNBP1Q5YKI7 109 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 DEFB127Q9H1M4 99 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 BCO1Q9HAY6 547 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 LIPGQ9Y5X9 500 aa16.33■□□□□ 0.21
RFTN1-201ENST00000334133 DIRAS3O95661 229 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 OR8B8Q15620 311 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 NUFIP2Q7Z417 695 aaKnown RBP16.33■□□□□ 0.2
RFTN1-201ENST00000334133 LRRC46Q96FV0 321 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 ZPBPQ9BS86 351 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 ADAT1Q9BUB4 502 aaKnown RBP16.33■□□□□ 0.2
RFTN1-201ENST00000334133 DDA1Q9BW61 102 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 PARP12Q9H0J9 701 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms