RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MRPL2Q5T653 305 aaKnown RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 DPPA3Q6W0C5 159 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 HOGA1Q86XE5 327 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 FAM89BQ8N5H3 189 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ZFP62Q8NB50 900 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ELOA3Q8NG57 546 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 OR6K6Q8NGW6 343 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF417Q8TAU3 575 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 NUS1Q96E22 293 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 REEP6Q96HR9 211 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 FAM71F1Q96KD3 344 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ADOQ96SZ5 270 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 SDF2Q99470 211 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM9BQ9NQ34 198 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 SOHLH2Q9NX45 425 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 KIAA1456Q9P272 454 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 CLEC18AA5D8T8 446 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 C4orf51C9J302 202 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 SLC17A2O00624 439 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 SCGB1D2O95969 90 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 PDGFBP01127 241 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 TACSTD2P09758 323 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 HIST1H1CP16403 213 aaKnown RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 CEBPBP17676 345 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 COMPP49747 757 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 RAB28P51157 221 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 DUSP3P51452 185 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 PRDX1Q06830 199 aaKnown RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 C17orf67Q0P5P2 114 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 IAH1Q2TAA2 248 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ACTL10Q5JWF8 245 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 RAB42Q8N4Z0 105 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 EXD3Q8N9H8 876 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 CLEC18CQ8NCF0 446 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 MAFAQ8NHW3 353 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 TNFRSF13CQ96RJ3 184 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 PLSCR4Q9NRQ2 329 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 CKLFQ9UBR5 152 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 CACNA1CQ13936 2221 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 A0A0B4J2E0 115 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 CENPVL1A0A0U1RR11 272 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-201ENST00000328923 A0A1B0GX12 115 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 WIPF3A6NGB9 483 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 K7ERU9 68 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 NDUFB2O95178 105 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 PFN1P07737 140 aaKnown RBP10.4□□□□□ -0.74
SHMT2-201ENST00000328923 TNFSF4P23510 183 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-201ENST00000328923 RAB11AP62491 216 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 EXOSC7Q15024 291 aaKnown RBP10.4□□□□□ -0.74
SHMT2-201ENST00000328923 SNAI3Q3KNW1 292 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 TRIM61Q5EBN2 209 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF506Q5JVG8 444 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 Q6ZN92 141 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 PARS2Q7L3T8 475 aaKnown RBP10.4□□□□□ -0.74
SHMT2-201ENST00000328923 AMZ2Q86W34 360 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF596Q8TC21 504 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 KLHDC3Q9BQ90 382 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 CLN8Q9UBY8 286 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 GTF2A1LQ9UNN4 478 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 MUC3AQ02505 3323 aa10.4□□□□□ -0.74
SHMT2-201ENST00000328923 IGKV1-8A0A0C4DH67 115 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 K7ESM1 405 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 SAP30O75446 220 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 CTSDP07339 412 aaPredicted RBP10.4□□□□□ -0.75
SHMT2-201ENST00000328923 GLRA1P23415 457 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 AK4P27144 223 aaPredicted RBP10.4□□□□□ -0.75
SHMT2-201ENST00000328923 BCL6P41182 706 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 CNN1P51911 297 aaKnown RBP10.4□□□□□ -0.75
SHMT2-201ENST00000328923 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.75
SHMT2-201ENST00000328923 CLDN6P56747 220 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 FAM90A2PQ658T7 463 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 FAM180AQ6UWF9 173 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 FAM220AQ7Z4H9 259 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 MCEMP1Q8IX19 187 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF595Q8IYB9 648 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 LRRC25Q8N386 305 aaPredicted RBP10.4□□□□□ -0.75
SHMT2-201ENST00000328923 D2HGDHQ8N465 521 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 CSNK1A1LQ8N752 337 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 GRHL3Q8TE85 626 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 CYB5D2Q8WUJ1 264 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 CTHRC1Q96CG8 243 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 LRRC3BQ96PB8 259 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 RASL10BQ96S79 203 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 TXN2Q99757 166 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 GABRG3Q99928 467 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 SLC45A2Q9UMX9 530 aa10.4□□□□□ -0.75
SHMT2-201ENST00000328923 C4orf47A7E2U8 309 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 C1QTNF3-AMACRE9PGA6 284 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 FAHP16930 419 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 BMP5P22003 454 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 LGALS7P47929 136 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ASCL1P50553 236 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 RPL23AP62750 156 aaKnown RBP10.39□□□□□ -0.75
SHMT2-201ENST00000328923 SCGB2A2Q13296 93 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms