RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 NAXEQ8NCW5 288 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 OR4X1Q8NH49 305 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 ADAMTS18Q8TE60 1221 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 BMFQ96LC9 184 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 GAL3ST4Q96RP7 486 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 SNHG12Q9BXW3 62 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 PNO1Q9NRX1 252 aaKnown RBP11.16□□□□□ -0.62
CCDC60-201ENST00000327554 ANXA10Q9UJ72 324 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 A0A1B0GU03 582 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 CLDN34H7C241 214 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF205O95201 554 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 TMEM225BP0DP42 221 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 CD200P41217 278 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 POU3F1Q03052 451 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-201ENST00000327554 ZFP36L1Q07352 338 aaKnown RBP11.16□□□□□ -0.62
CCDC60-201ENST00000327554 PPA1Q15181 289 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 OGFOD3Q6PK18 319 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 LANCL3Q6ZV70 420 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 OOSP2Q86WS3 158 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 COL5A1P20908 1838 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-201ENST00000327554 C2orf16Q68DN1 1984 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 TSPAN2O60636 221 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 CYB5R3P00387 301 aaPredicted RBP11.15□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF728P0DKX0 622 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 IL12BP29460 328 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 AKT2P31751 481 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 RPL23AP62750 156 aaKnown RBP11.15□□□□□ -0.62
CCDC60-201ENST00000327554 H3F3AP84243 136 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 HSF1Q00613 529 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 DNASE2BQ8WZ79 361 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 MMABQ96EY8 250 aaPredicted RBP11.15□□□□□ -0.62
CCDC60-201ENST00000327554 TBL1XR1Q9BZK7 514 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 HIPK2Q9H2X6 1198 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 KLHL13Q9P2N7 655 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 DKKL1Q9UK85 242 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF732B4DXR9 585 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 STMND1H3BQB6 276 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 FOLR1P15328 257 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 CTNNB1P35222 781 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 NOVA1P51513 510 aaKnown RBP11.15□□□□□ -0.62
CCDC60-201ENST00000327554 ABCA11PQ4W5N1 156 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 PHLDA2Q53GA4 152 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 SLC38A9Q8NBW4 561 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 NPRL2Q8WTW4 380 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 RBMXL1Q96E39 390 aaKnown RBP11.15□□□□□ -0.62
CCDC60-201ENST00000327554 EMC6Q9BV81 110 aa11.15□□□□□ -0.62
CCDC60-201ENST00000327554 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.62
CCDC60-201ENST00000327554 NPIPB13A6NJU9 1138 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 NPIPB4C9JG80 1138 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 IGKV3-11P04433 115 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 GNMTQ14749 295 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 TAF9Q16594 264 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 COA6Q5JTJ3 125 aaKnown RBP11.14□□□□□ -0.63
CCDC60-201ENST00000327554 COL13A1Q5TAT6 717 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-201ENST00000327554 RTL6Q6ICC9 239 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 DOK3Q7L591 496 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 SLC16A14Q7RTX9 510 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 P4HA3Q7Z4N8 544 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 LGI3Q8N145 548 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 D2HGDHQ8N465 521 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 C12orf76Q8N812 135 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-201ENST00000327554 OR5L1Q8NGL2 311 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 SLC37A2Q8TED4 501 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 HAS2Q92819 552 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 SLC2A9Q9NRM0 540 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 C5orf63A6NC05 138 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF705GA8MUZ8 300 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-201ENST00000327554 E9PLN8 166 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 SEMA4FO95754 770 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 GCGP01275 180 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 EPHA1P21709 976 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 OMGP23515 440 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 COL10A1Q03692 680 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 RUNX3Q13761 415 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 RAB35Q15286 201 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF880Q6PDB4 577 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 H1FNTQ75WM6 255 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF721Q8TF20 911 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 LIN37Q96GY3 246 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-201ENST00000327554 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 GLRX2Q9NS18 164 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 SLC7A11Q9UPY5 501 aa11.14□□□□□ -0.63
CCDC60-201ENST00000327554 RP1P56715 2156 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 FAM221AA4D161 298 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 MARCH11A6NNE9 402 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 DFFBO76075 338 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 DDAH2O95865 285 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 ACRP10323 421 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 NR2C1P13056 603 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 GABRR1P24046 479 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 RRADP55042 308 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 BIDP55957 195 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 RUNX1Q01196 453 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms