RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 NHLH2Q02577 135 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 SRSF4Q08170 494 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 HFEQ30201 348 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 HLA-BQ31612 363 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 WIPI1Q5MNZ9 446 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 SPEM1Q8N4L4 309 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 IFI44Q8TCB0 444 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 DUSP23Q9BVJ7 150 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 LUZP4Q9P127 313 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CHCHD2Q9Y6H1 151 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 ARPC4-TTLL3A0A0A6YYG9 625 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 PRF1P14222 555 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 TDHQ8IZJ6 230 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 SMCO4Q9NRQ5 59 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 RCC2Q9P258 522 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 FAM157CP0CG43 387 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 GDF1P27539 372 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 LSM6P62312 80 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF468Q5VIY5 522 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 RPUSD3Q6P087 351 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF695Q8IW36 515 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 DNAJB11Q9UBS4 358 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 R4GN57 208 aa11.24□□□□□ -0.61
HMGCS1-201ENST00000325110 PATE3B3GLJ2 98 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 H3BP45 60 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 TAAR5O14804 337 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 CST7O76096 145 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 CD79AP11912 226 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF16P17020 682 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF845Q96IR2 970 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 SH3BGRL3Q9H299 93 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 SLC2A9Q9NRM0 540 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 EML6Q6ZMW3 1958 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 C9JQL5 133 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 GPR37O15354 613 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 MBPP02686 304 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 MPZP25189 248 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 SLC16A13Q7RTY0 426 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 OSR2Q8N2R0 312 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 OR1F12Q8NHA8 337 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 UBALD1Q8TB05 177 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 SRXN1Q9BYN0 137 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 A6NLC8 198 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 UMAD1C9J7I0 102 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 VAMP5O95183 116 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 CD37P11049 281 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 GUK1Q16774 197 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 VASH2Q86V25 355 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 LHFPL1Q86WI0 220 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 ZFP62Q8NB50 900 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 OR52M1Q8NGK5 317 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 IL1F10Q8WWZ1 152 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 RSRP1Q9BUV0 290 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 NAA60Q9H7X0 242 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 BCO1Q9HAY6 547 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 URGCP-MRPS24S4R325 110 aa11.23□□□□□ -0.61
HMGCS1-201ENST00000325110 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 IGLV3-12A0A075B6K2 115 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 hCG_1809904A0A1W2PP81 198 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A1W2PR64 198 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A1W2PRV1 198 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FAM24AA6NFZ4 105 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 CDRT15L2A8MXV6 281 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 E5RGE8 158 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 SSSCA1O60232 199 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 CTSDP07339 412 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 DSCR4P56555 118 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 AWAT1Q58HT5 328 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF529Q6P280 563 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 MARS2Q96GW9 593 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 NSG2Q9Y328 171 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 NUP210LQ5VU65 1888 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 HSD17B6O14756 317 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FOLR3P41439 243 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 LGI3Q8N145 548 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FAM24BQ8N5W8 94 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 AGBL5Q8NDL9 886 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 IP6K3Q96PC2 410 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FBLN5Q9UBX5 448 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 RFNGQ9Y644 331 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FREM1Q5H8C1 2179 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A1W2PPH5 198 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 DEDDO75618 318 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FCGR3AP08637 254 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 LIFP15018 202 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 HAGHQ16775 308 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 OR10AD1Q8NGE0 317 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 ABHD3Q8WU67 409 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 Q96M66 194 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 FOXB1Q99853 325 aa11.22□□□□□ -0.61
HMGCS1-201ENST00000325110 TRBV6-7A0A0A0MS04 114 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms