RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 IL15RAQ13261 267 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 MST1LQ2TV78 715 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 PPP1R32Q7Z5V6 425 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 OR5T2Q8NGG2 359 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 P4HTMQ9NXG6 502 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 OR7C1O76099 320 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 FCGR3AP08637 254 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 LPAR6P43657 344 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 NOVA1P51513 510 aaKnown RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 CLDN15P56746 228 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 SURF2Q15527 256 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 ACER2Q5QJU3 275 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 LYZL2Q7Z4W2 148 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 OR11L1Q8NGX0 322 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 RTN4IP1Q8WWV3 396 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 WNT5BQ9H1J7 359 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF442Q9H7R0 627 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 NECAP2Q9NVZ3 263 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 FBXL17Q9UF56 701 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 TCFL5Q9UL49 500 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 TIMM10BQ9Y5J6 103 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF587BE7ETH6 402 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 LAMTOR5O43504 91 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 CTSDP07339 412 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 CYC1P08574 325 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 CST2P09228 141 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 DUSP3P51452 185 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 TMEM33P57088 247 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 TCEAL6Q6IPX3 200 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 TCEAL3Q969E4 200 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 CDX2Q99626 313 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 SF3B5Q9BWJ5 86 aaKnown RBP15.11■□□□□ 0.01
COL9A1-201ENST00000320755 OR2H1Q9GZK4 316 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 RHOFQ9HBH0 211 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 KCNIP3Q9Y2W7 256 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 OSR2Q8N2R0 312 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 OR2V1Q8NHB1 315 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 CRYM-AS1A6NIL9 109 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 CHATP28329 748 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 FAM3AP98173 230 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 RTL6Q6ICC9 239 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 CPT1CQ8TCG5 803 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 C10orf35Q96D05 121 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 BSCL2Q96G97 398 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-201ENST00000320755 SAV1Q9H4B6 383 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-201ENST00000320755 MMP26Q9NRE1 261 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 UQCC1Q9NVA1 299 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 SLC7A11Q9UPY5 501 aa15.1■□□□□ 0.01
COL9A1-201ENST00000320755 LRRC3CA6NJW4 275 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 LYL1P12980 280 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 MUC1P15941 1255 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-201ENST00000320755 NPBWR2P48146 333 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 PJVKQ0ZLH3 352 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 PABPC1L2AQ5JQF8 200 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 SLC25A26Q70HW3 274 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 CALHM1Q8IU99 346 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 ADAMTS17Q8TE56 1095 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 PRRX2Q99811 253 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 DNAJB11Q9UBS4 358 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 NPBWR1P48145 328 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 MEX3BQ6ZN04 569 aaKnown RBP15.09■□□□□ 0.01
COL9A1-201ENST00000320755 TIPARPQ7Z3E1 657 aaKnown RBP15.09■□□□□ 0.01
COL9A1-201ENST00000320755 ERGIC1Q969X5 290 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 AIFM2Q9BRQ8 373 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 GPR35Q9HC97 309 aa15.09■□□□□ 0.01
COL9A1-201ENST00000320755 OR6C6A6NF89 314 aa15.08■□□□□ 0.01
COL9A1-201ENST00000320755 HSPB6O14558 160 aa15.08■□□□□ 0.01
COL9A1-201ENST00000320755 CYB561P49447 251 aa15.08■□□□□ 0.01
COL9A1-201ENST00000320755 PDZK1IP1Q13113 114 aa15.08■□□□□ 0.01
COL9A1-201ENST00000320755 DCAF12Q5T6F0 453 aa15.08■□□□□ 0.01
COL9A1-201ENST00000320755 MED19A0JLT2 244 aaPredicted RBP15.08■□□□□ 0
COL9A1-201ENST00000320755 NFYBP25208 207 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 TRA2AQ13595 282 aaKnown RBP eCLIP15.08■□□□□ 0
COL9A1-201ENST00000320755 PPA1Q15181 289 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 LHFPL2Q6ZUX7 228 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 CPEB3Q8NE35 698 aaKnown RBP15.08■□□□□ 0
COL9A1-201ENST00000320755 KCNE4Q8WWG9 221 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 GPHA2Q96T91 129 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 BCO1Q9HAY6 547 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 PURGQ9UJV8 347 aaKnown RBP15.08■□□□□ 0
COL9A1-201ENST00000320755 CD80P33681 288 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 ASCL1P50553 236 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 EIF3IQ13347 325 aaKnown RBP15.08■□□□□ 0
COL9A1-201ENST00000320755 STK11Q15831 433 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 TMEM105Q8N8V8 129 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 PLA2G2EQ9NZK7 142 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 EDARQ9UNE0 448 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 KIAA1549Q9HCM3 1950 aa15.08■□□□□ 0
COL9A1-201ENST00000320755 RRP8O43159 456 aaKnown RBP15.07■□□□□ 0
COL9A1-201ENST00000320755 DEDDO75618 318 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 CER1O95813 267 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 MBPP02686 304 aaPredicted RBP15.07■□□□□ 0
COL9A1-201ENST00000320755 MALLQ13021 153 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 CT55Q8WUE5 264 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 HES7Q9BYE0 225 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 A0A1B0GV50 99 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 H7C2Y5 167 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 CELA3AP09093 270 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 EIF5AL1Q6IS14 154 aaKnown RBP15.07■□□□□ 0
COL9A1-201ENST00000320755 ZNF611Q8N823 705 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms