RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZZEF1O43149 2961 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 ZFHX4Q86UP3 3567 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 A0A1W2PPH5 198 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 NME2P1O60361 137 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 H2BFMP0C1H6 154 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 NME2P22392 152 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 LHX2P50458 406 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 CLDN12P56749 244 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 SOX8P57073 446 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 RHEBQ15382 184 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 BEX5Q5H9J7 111 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 IGF2-ASQ6U949 168 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 BTNL8Q6UX41 500 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 UNQ6126/PRO20091Q6UXV3 157 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF433Q8N7K0 673 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-201ENST00000317677 UBAC2Q8NBM4 344 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 SNIP1Q8TAD8 396 aaKnown RBP11.4□□□□□ -0.58
CPNE1-201ENST00000317677 ASB5Q8WWX0 329 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 SULT4A1Q9BR01 284 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 SF3B5Q9BWJ5 86 aaKnown RBP11.4□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF552Q9H707 407 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-201ENST00000317677 OR52A1Q9UKL2 312 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 CSAG2Q9Y5P2 127 aa11.4□□□□□ -0.58
CPNE1-201ENST00000317677 ELOA3CA0A087WX78 387 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 OR5H15A6NDH6 313 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 RER1O15258 196 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 YIF1AO95070 293 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 MPZP25189 248 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 CD34P28906 385 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 MEOX1P50221 254 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 PRKXP51817 358 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 ATP1B3P54709 279 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 CLDN18P56856 261 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 OR2B8PP59922 312 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 ENDOGQ14249 297 aaKnown RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 RNASE10Q5GAN6 216 aaKnown RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 KRBOX4Q5JUW0 171 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 HIST2H3AQ71DI3 136 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 C20orf196Q8IYI0 205 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 OR1J2Q8NGS2 313 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 CPNE2Q96FN4 548 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 YPEL4Q96NS1 127 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 MICU1Q9BPX6 476 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF407Q9C0G0 2248 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 TMEM269A0A1B0GVZ9 245 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 hCG_1809904A0A1W2PP81 198 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 A0A1W2PR64 198 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 A0A1W2PRV1 198 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 TTRP02766 147 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 MAS1P04201 325 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 MMP16P51512 607 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 KIAA0141Q14154 515 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 RSU1Q15404 277 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 EIF5AL1Q6IS14 154 aaKnown RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 ALKBH2Q6NS38 261 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 LYPD6BQ8NI32 183 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 TMED6Q8WW62 240 aa11.39□□□□□ -0.59
CPNE1-201ENST00000317677 NKX3-1Q99801 234 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-201ENST00000317677 LOC107986453A0A1B0GWG9 222 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 C9JQL5 133 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 P2RY10O00398 339 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 DHHO43323 396 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 TLX3O43711 291 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-201ENST00000317677 ISG15P05161 165 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 PTHLHP12272 177 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 PLA2G7Q13093 441 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 GAMTQ14353 236 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 SURF2Q15527 256 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-201ENST00000317677 RNFT1Q5M7Z0 435 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 STEAP1BQ6NZ63 245 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 HEPN1Q6WQI6 88 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 ABHD3Q8WU67 409 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 R3HDM4Q96D70 268 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 NDUFAF3Q9BU61 184 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 LIPGQ9Y5X9 500 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 LOC400499M0QZD8 3231 aa11.38□□□□□ -0.59
CPNE1-201ENST00000317677 C5orf63A6NC05 138 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 A8MWP6 167 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 CYTIPO60759 359 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 MBP02144 154 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 GTF2F2P13984 249 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 IGFBP3P17936 291 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-201ENST00000317677 TNFRSF9Q07011 255 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 DHRS2Q13268 280 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 C21orf62-AS1Q17RA5 79 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 HYAL4Q2M3T9 481 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 AWAT1Q58HT5 328 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 HIST2H3PS2Q5TEC6 136 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ANKRD16Q6P6B7 361 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.37□□□□□ -0.59
CPNE1-201ENST00000317677 COMMD1Q8N668 190 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 OR1J1Q8NGS3 322 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ATG5Q9H1Y0 275 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 PARP11Q9NR21 331 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms