RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 TRIM16LQ309B1 348 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 ZNF57Q68EA5 555 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-202ENST00000316673 FIP1L1Q6UN15 594 aaKnown RBP13.1□□□□□ -0.31
HNF4A-202ENST00000316673 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 OR10R2Q8NGX6 335 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 HPSE2Q8WWQ2 592 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 COX4I2Q96KJ9 171 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 ABHD1Q96SE0 405 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 SDHCQ99643 169 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-202ENST00000316673 C7orf50Q9BRJ6 194 aaKnown RBP13.1□□□□□ -0.31
HNF4A-202ENST00000316673 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 CACNG6Q9BXT2 260 aa13.1□□□□□ -0.31
HNF4A-202ENST00000316673 MYEF2Q9P2K5 600 aaKnown RBP13.1□□□□□ -0.31
HNF4A-202ENST00000316673 LRBAP50851 2863 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FBN2P35556 2912 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A10PA6NDY2 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A18PA6NE21 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A16PA6NEW6 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A20PA6NIJ5 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A8PA6NJQ4 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A7PA6NKC0 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 C17orf100A8MU93 164 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A22PA8MWA6 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A12PA8MX19 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A5PA8MXJ8 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A23PA8MXZ1 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 J3QT63 122 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 RBBP9O75884 186 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A15PP0C7V4 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A13PP0C7W8 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A14PP0C7W9 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 FAM90A24PP0C7X0 464 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 PTH2RP49190 550 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 EFNB2P52799 333 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 UNC119Q13432 240 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 SLC25A26Q70HW3 274 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 OSR2Q8N2R0 312 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 NRGNQ92686 78 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 RAB3CQ96E17 227 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
HNF4A-202ENST00000316673 SELENOIQ9C0D9 397 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 LIME1Q9H400 295 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 ZNF701Q9NV72 531 aaPredicted RBP13.09□□□□□ -0.31
HNF4A-202ENST00000316673 PLEKHA6Q9Y2H5 1048 aa13.09□□□□□ -0.31
HNF4A-202ENST00000316673 POLQO75417 2590 aa13.08□□□□□ -0.31
HNF4A-202ENST00000316673 CREBBPQ92793 2442 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 IGKV1-27A0A075B6S5 117 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 A0A1W2PQ09 198 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 PLATP00750 562 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 VEGFCP49767 419 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 ASAH1Q13510 395 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 BAK1Q16611 211 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 PNLIPRP3Q17RR3 467 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 OR10K2Q6IF99 312 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 NEU4Q8WWR8 484 aaPredicted RBP13.08□□□□□ -0.32
HNF4A-202ENST00000316673 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.32
HNF4A-202ENST00000316673 NKX3-1Q99801 234 aaPredicted RBP13.08□□□□□ -0.32
HNF4A-202ENST00000316673 GSX2Q9BZM3 304 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 EGLN1Q9GZT9 426 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
HNF4A-202ENST00000316673 BARX1Q9HBU1 254 aaPredicted RBP13.08□□□□□ -0.32
HNF4A-202ENST00000316673 A0A1B0GWJ7 208 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 VGLL3A8MV65 326 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 SPRY1O43609 319 aaPredicted RBP13.07□□□□□ -0.32
HNF4A-202ENST00000316673 LPLP06858 475 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 MPZP25189 248 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 CBX5P45973 191 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
HNF4A-202ENST00000316673 MADCAM1Q13477 382 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 ALKBH6Q3KRA9 238 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 ELP2Q6IA86 826 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 HAGHLQ6PII5 290 aaPredicted RBP13.07□□□□□ -0.32
HNF4A-202ENST00000316673 IZUMO1Q8IYV9 350 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 LRRC75A-AS1Q8N1F1 130 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 FAM89BQ8N5H3 189 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 CHPT1Q8WUD6 406 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 GAL3ST1Q99999 423 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 BANF2Q9H503 90 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 AUNIPQ9H7T9 357 aa13.07□□□□□ -0.32
HNF4A-202ENST00000316673 ZNF107Q9UII5 783 aaPredicted RBP13.07□□□□□ -0.32
HNF4A-202ENST00000316673 USF3Q68DE3 2245 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 SERPINE3A8MV23 424 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 RAB27BO00194 218 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 ACAA1P09110 424 aaPredicted RBP13.06□□□□□ -0.32
HNF4A-202ENST00000316673 CSF1P09603 554 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 CDKN1AP38936 164 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 SRP9P49458 86 aaKnown RBP13.06□□□□□ -0.32
HNF4A-202ENST00000316673 GNG2P59768 71 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 DYRK1AQ13627 763 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 DMRTC1Q5HYR2 192 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
HNF4A-202ENST00000316673 NHLRC3Q5JS37 347 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms