RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PDCD6O75340 191 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 CXCL2P19875 107 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 PI3P19957 117 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 BAMBIQ13145 260 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 NSUN5P2Q63ZY6 315 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 PEG10Q86TG7 708 aaKnown RBP15.75■□□□□ 0.11
CCDC43-201ENST00000315286 RBMXL3Q8N7X1 1067 aaKnown RBP15.75■□□□□ 0.11
CCDC43-201ENST00000315286 OR8H1Q8NGG4 311 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 OR5M8Q8NGP6 311 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 TMEM230Q96A57 120 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 HS3ST6Q96QI5 342 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 MTCH1Q9NZJ7 389 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 ANXA10Q9UJ72 324 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 EDARQ9UNE0 448 aa15.75■□□□□ 0.11
CCDC43-201ENST00000315286 APC2O95996 2303 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 FAM221AA4D161 298 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 OR7C1O76099 320 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-201ENST00000315286 RGS11O94810 467 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 FCGR3AP08637 254 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 COX5AP20674 150 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 NFYAP23511 347 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-201ENST00000315286 FPR2P25090 351 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 TAS2R31P59538 309 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 INO80CQ6PI98 192 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-201ENST00000315286 ZNF767PQ75MW2 155 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 SAXO1Q8IYX7 474 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 TMEM185AQ8NFB2 350 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 CCDC120Q96HB5 630 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 RTBDNQ9BSG5 229 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-201ENST00000315286 C1QTNF6Q9BXI9 259 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 CDH20Q9HBT6 801 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 PLSCR4Q9NRQ2 329 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 MPC1Q9Y5U8 109 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 CCSO14618 274 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 SMPD2O60906 423 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 FUT3P21217 361 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 DTYMKP23919 212 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 ARPC4P59998 168 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 MRPL49Q13405 166 aaKnown RBP15.74■□□□□ 0.11
CCDC43-201ENST00000315286 GRK1Q15835 563 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 TMEM128Q5BJH2 165 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 ELP2Q6IA86 826 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 SEM1Q6ZVN7 128 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 TMEM200AQ86VY9 491 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 LILRB4Q8NHJ6 448 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 ASB13Q8WXK3 278 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 ELMOD3Q96FG2 381 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 PHB2Q99623 299 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 LUZP4Q9P127 313 aa15.74■□□□□ 0.11
CCDC43-201ENST00000315286 ANKRD11Q6UB99 2663 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-201ENST00000315286 MCRIP1C9JLW8 97 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 RRP8O43159 456 aaKnown RBP15.73■□□□□ 0.11
CCDC43-201ENST00000315286 SYNGR1O43759 233 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 NOS1APO75052 506 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-201ENST00000315286 TNFSF13O75888 250 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 MPC2O95563 127 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 DUS4LO95620 317 aaKnown RBP15.73■□□□□ 0.11
CCDC43-201ENST00000315286 CA6P23280 308 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 TEX261Q6UWH6 196 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 WDR31Q8NA23 367 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 SCGB3A2Q96PL1 93 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 DPCDQ9BVM2 203 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-201ENST00000315286 OR2J1Q9GZK6 312 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 U3KQ87 197 aa15.73■□□□□ 0.11
CCDC43-201ENST00000315286 AGFG2O95081 481 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 PPP3CBP16298 524 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 HLA-GP17693 338 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 GLRA1P23415 457 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 HTR2BP41595 481 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 FGF12P61328 243 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 ERVS71-1P61550 626 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 SEC61A1P61619 476 aaKnown RBP15.72■□□□□ 0.11
CCDC43-201ENST00000315286 PPP1CBP62140 327 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 SORDQ00796 357 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 IGFBP7Q16270 282 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 PLEKHN1Q494U1 663 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-201ENST00000315286 HAGHLQ6PII5 290 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-201ENST00000315286 FBXW12Q6X9E4 464 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 KCTD9Q7L273 389 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 MKXQ8IYA7 352 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 ZNF610Q8N9Z0 462 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 POM121Q96HA1 1249 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 LHX6Q9UPM6 363 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 DMXL2Q8TDJ6 3036 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 J3QW42 95 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 HOXB1P14653 301 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-201ENST00000315286 FOXC1Q12948 553 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 LPCAT3Q6P1A2 487 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 STARD4Q96DR4 205 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 SEC22AQ96IW7 307 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 ZNF2Q9BSG1 426 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-201ENST00000315286 ZNF442Q9H7R0 627 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 IL36RNQ9UBH0 155 aa15.72■□□□□ 0.11
CCDC43-201ENST00000315286 ACACAQ13085 2346 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 FXYD6-FXYD2A0A087WZ82 144 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 OR5B21A6NL26 309 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 HMSDA8MTL9 139 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 TRAPPC2LH3BP13 241 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 ARPC5O15511 151 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 CBR1P16152 277 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms