RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 MPC1Q9Y5U8 109 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 IL5P05113 134 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 TAS2R45P59539 299 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 SPINK9Q5DT21 86 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 AVPI1Q5T686 147 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 DHRS9Q9BPW9 319 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 SLA2Q9H6Q3 261 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 LIPGQ9Y5X9 500 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 SLC17A2O00624 439 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 SSX4O60224 188 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 RAB7AP51149 207 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 LIMK1P53667 647 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 OR2H1Q9GZK4 316 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 ADGRL4Q9HBW9 690 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 A0A0J9YW62 118 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 FABP7O15540 132 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 AQP8O94778 261 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 EIF4EBP2Q13542 120 aaPredicted RBP11.91□□□□□ -0.5
RFFL-201ENST00000315249 FCN2Q15485 313 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 CIB3Q96Q77 187 aaPredicted RBP11.91□□□□□ -0.5
RFFL-201ENST00000315249 PRELID1Q9Y255 219 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 HAX1O00165 279 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 PNPP00491 289 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 CTSBP07858 339 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 ANKRD34CP0C6C1 535 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 C19orf57Q0VDD7 668 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 EXOSC2Q13868 293 aaKnown RBP11.9□□□□□ -0.5
RFFL-201ENST00000315249 SP6Q3SY56 376 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 DGAT2L6Q6ZPD8 337 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 GUCD1Q96NT3 240 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 CCL19Q99731 98 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 RAB33BQ9H082 229 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 UGT2A1Q9Y4X1 527 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 TXNL1O43396 289 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 ZFPL1O95159 310 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
RFFL-201ENST00000315249 OR5I1Q13606 314 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 TMEM38BQ9NVV0 291 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 POMT1Q9Y6A1 747 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 P2RX3P56373 397 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 ST8SIA2Q92186 375 aa11.9□□□□□ -0.5
RFFL-201ENST00000315249 RPS10-NUDT3A0A1W2PQS6 291 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 OR5H14A6NHG9 310 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 OR5H1A6NKK0 313 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 APELAP0DMC3 54 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 DHODHQ02127 395 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 SPICQ8N5J4 248 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 INSIG2Q9Y5U4 225 aa11.9□□□□□ -0.51
RFFL-201ENST00000315249 SULT1C2O00338 296 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 IGFBP7Q16270 282 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 MESTQ5EB52 335 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 PCNPQ8WW12 178 aaKnown RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 TXN2Q99757 166 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF665Q9H7R5 613 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 PRSS50Q9UI38 385 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 MN1Q10571 1320 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 C1orf196B1AJZ1 125 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 XRCC3O43542 346 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF705DP0CH99 300 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF705BP0CI00 300 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 BCL3P20749 454 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 FGF7P21781 194 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 PCMT1P22061 227 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 DCTDP32321 178 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 OPCMLQ14982 345 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 PNLIPRP3Q17RR3 467 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 KLK11Q9UBX7 282 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 A0A1W2PR77 199 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 ONECUT2O95948 504 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 ADIRFQ15847 76 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 TNXAQ16473 311 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF75AQ96N20 296 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 LRFN3Q9BTN0 628 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 GPR31O00270 319 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 HAND1O96004 215 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 GYPAP02724 150 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 INSL4Q14641 139 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 C12orf73Q69YU5 71 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 SLC35B4Q969S0 331 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 SEBOXQ9HB31 216 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF275Q9NSD4 429 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 ARG1P05089 322 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 DEGS2Q6QHC5 323 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 ZNF574Q6ZN55 896 aaPredicted RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 OR13D1Q8NGV5 346 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 APH1BQ8WW43 257 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 UQCC2Q9BRT2 126 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 UPK3AO75631 287 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 CD80P33681 288 aa11.89□□□□□ -0.51
RFFL-201ENST00000315249 MDH2P40926 338 aaKnown RBP11.89□□□□□ -0.51
RFFL-201ENST00000315249 TRAT1Q6PIZ9 186 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms