RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 FN3KRPQ9HA64 309 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 ELL3Q9HB65 397 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-201ENST00000311487 TMEM106BQ9NUM4 274 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 NOP16Q9Y3C1 178 aaKnown RBP15.3■□□□□ 0.04
HMGA1-201ENST00000311487 A0A0B4J203 849 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 IGKV1-12A0A0C4DH73 117 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 IGKV1D-12P01611 117 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 HLA-DQB1P01920 261 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 HES5Q5TA89 166 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 NRARPQ7Z6K4 114 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 ZNF573Q86YE8 665 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 Q8N402 240 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 OR4M1Q8NGD0 313 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 OR5T2Q8NGG2 359 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 OR4D6Q8NGJ1 314 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 TNFAIP8L1Q8WVP5 186 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 RDH5Q92781 318 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 MTCH1Q9NZJ7 389 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 AKAP9Q99996 3911 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 LINC00854A0A1B0GVQ3 168 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 CD80P33681 288 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 PDZK1IP1Q13113 114 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 OR5H6Q8NGV6 325 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 OR51F2Q8NH61 342 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 TECTBQ96PL2 329 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 ABRACLQ9P1F3 81 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 IL36RNQ9UBH0 155 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 ING4Q9UNL4 249 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 SVEP1Q4LDE5 3571 aa15.29■□□□□ 0.04
HMGA1-201ENST00000311487 TMEM210A6NLX4 147 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 PPIHO43447 177 aaKnown RBP15.28■□□□□ 0.04
HMGA1-201ENST00000311487 SNRPBP14678 240 aaKnown RBP15.28■□□□□ 0.04
HMGA1-201ENST00000311487 BCL3P20749 454 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 GATA4P43694 442 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 MZT1Q08AG7 82 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 CELF2-AS1Q8N7Q2 184 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 GSX2Q9BZM3 304 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 RBFOX1Q9NWB1 397 aaKnown RBP15.28■□□□□ 0.04
HMGA1-201ENST00000311487 CELSR1Q9NYQ6 3014 aa15.28■□□□□ 0.04
HMGA1-201ENST00000311487 A0A0G2JMP0 313 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 A0A0X1KG70 313 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 A0A1W2PP11 408 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 PDCD5O14737 125 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 PLA2G10O15496 165 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 RP2O75695 350 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 ZP1P60852 638 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 CBX3Q13185 183 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 GCSAMQ8N6F7 178 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 OR4M2Q8NGB6 313 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 THRSPQ92748 146 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 NEDD4LQ96PU5 975 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 C11orf54Q9H0W9 315 aaPredicted RBP15.27■□□□□ 0.04
HMGA1-201ENST00000311487 FBXO9Q9UK97 447 aaPredicted RBP15.27■□□□□ 0.04
HMGA1-201ENST00000311487 EDARQ9UNE0 448 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 TEX15Q9BXT5 2789 aa15.27■□□□□ 0.04
HMGA1-201ENST00000311487 ALX3O95076 343 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 PTBP3O95758 552 aaKnown RBP15.27■□□□□ 0.03
HMGA1-201ENST00000311487 SFTPBP07988 381 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 TALDO1P37837 337 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 PTGFRP43088 359 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 PDCD1Q15116 288 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 TRIQKQ629K1 86 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 OR10K2Q6IF99 312 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 GAL3ST1Q99999 423 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 TLNRD1Q9H1K6 362 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 BEX4Q9NWD9 120 aaPredicted RBP15.27■□□□□ 0.03
HMGA1-201ENST00000311487 RNF7Q9UBF6 113 aa15.27■□□□□ 0.03
HMGA1-201ENST00000311487 TMEM178BH3BS89 294 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 J3QT63 122 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 IRF2P14316 349 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 DUSP1P28562 367 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 SLC22A6Q4U2R8 563 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 AWAT2Q6E213 333 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 GLIPR1L1Q6UWM5 242 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 DTX3Q8N9I9 347 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 OR11L1Q8NGX0 322 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 FAM46BQ96A09 425 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 V9GY05 133 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 MYO9AB2RTY4 2548 aa15.26■□□□□ 0.03
HMGA1-201ENST00000311487 MED13LQ71F56 2210 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 IGHV4-30-2A0A087WSY4 118 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 ALDOBP05062 364 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 SERPINA2P20848 420 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 CEBPDP49716 269 aaPredicted RBP15.25■□□□□ 0.03
HMGA1-201ENST00000311487 CD300CQ08708 224 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 Q5PR19 223 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 GLT8D1Q68CQ7 371 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 LYPD6Q86Y78 171 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 SPATA2Q9UM82 520 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 MRPS28Q9Y2Q9 187 aaKnown RBP15.25■□□□□ 0.03
HMGA1-201ENST00000311487 LRRC30A6NM36 301 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 IFITM5A6NNB3 132 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 AIPO00170 330 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 GLRA1P23415 457 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 PITPNBP48739 271 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 ART1P52961 327 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 ZMYND11Q15326 602 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 CLEC12BQ2HXU8 276 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 PNLDC1Q8NA58 520 aaKnown RBP15.25■□□□□ 0.03
HMGA1-201ENST00000311487 MAPK1IP1LQ8NDC0 245 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms