RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 RPUSD4Q96CM3 377 aaKnown RBP11.15□□□□□ -0.62
RETREG3-201ENST00000309428 TIMM8BQ9Y5J9 83 aaPredicted RBP11.15□□□□□ -0.62
RETREG3-201ENST00000309428 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 CLPSP04118 112 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 NR2C1P13056 603 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 HIST1H1DP16402 221 aaKnown RBP11.15□□□□□ -0.62
RETREG3-201ENST00000309428 CST9LP1Q5W188 147 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
RETREG3-201ENST00000309428 LRFN5Q96NI6 719 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 DENND4AQ7Z401 1863 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 MSTNO14793 375 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 B4GALT1P15291 398 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF528Q3MIS6 628 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 LINC00114Q6XXX2 140 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 IFI44Q8TCB0 444 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 TMEM37Q8WXS4 190 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 SHDQ96IW2 340 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF275Q9NSD4 429 aaPredicted RBP11.15□□□□□ -0.63
RETREG3-201ENST00000309428 WNT16Q9UBV4 365 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 WASF3Q9UPY6 502 aa11.15□□□□□ -0.63
RETREG3-201ENST00000309428 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 TRBV5-5A0A0J9YX44 114 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 PMS2P1A4D2B8 440 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 BTBD17A6NE02 478 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 H0YIZ8 118 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 HPNP05981 417 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 OR5AC1P0C628 307 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 FOSL1P15407 271 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 EDEM2Q9BV94 578 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 MYOTQ9UBF9 498 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 AUP1Q9Y679 476 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ABCA1O95477 2261 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 A0A087X0M5 115 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 A0A1B0GX30 115 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 HSD17B6O14756 317 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 SERPINE2P07093 398 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 CCL3P10147 92 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ANOS1P23352 680 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF345Q14585 488 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF600Q6ZNG1 722 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 LYZL2Q7Z4W2 148 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 BIVMQ86UB2 503 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 EDAQ92838 391 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 BSCL2Q96G97 398 aaPredicted RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF845Q96IR2 970 aaPredicted RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 PLK3Q9H4B4 646 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ABCA4P78363 2273 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 FAM166BA8MTA8 275 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 MS4A18H0YCH9 400 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 GEMIN2O14893 280 aaKnown RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 TSPAN2O60636 221 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 TCN2P20062 427 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 PPP1CCP36873 323 aaKnown RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 HAAOP46952 286 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 CSNK1A1P48729 337 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 FGF8P55075 233 aaPredicted RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 HMGN3Q15651 99 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 MS4A18Q3C1V0 323 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 LGI3Q8N145 548 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF610Q8N9Z0 462 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 OR5L2Q8NGL0 311 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 RHBDD1Q8TEB9 315 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 RARRES2Q99969 163 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 CABLES2Q9BTV7 478 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ULBP2Q9BZM5 246 aa11.14□□□□□ -0.63
RETREG3-201ENST00000309428 ALX4Q9H161 411 aaPredicted RBP11.14□□□□□ -0.63
RETREG3-201ENST00000309428 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 EIF4E2O60573 245 aaKnown RBP11.13□□□□□ -0.63
RETREG3-201ENST00000309428 CLN5O75503 358 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 MMP9P14780 707 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
RETREG3-201ENST00000309428 C3AR1Q16581 482 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 EMC4Q5J8M3 183 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SLC43A2Q8N370 569 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 RASL10BQ96S79 203 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 NSG1A0A0A6YYJ2 146 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SLC25A4P12235 298 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 OR8G2PQ6IF36 304 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF429Q86V71 674 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 HIST1H2AAQ96QV6 131 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SLC35B3Q9H1N7 401 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 H0YL77 283 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 LAMTOR5O43504 91 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SLC35A1P78382 337 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 RUNX1Q01196 453 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SMAD4Q13485 552 aaKnown RBP11.13□□□□□ -0.63
RETREG3-201ENST00000309428 SRPK3Q9UPE1 567 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 LAMP3Q9UQV4 416 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 WSB1Q9Y6I7 421 aa11.13□□□□□ -0.63
RETREG3-201ENST00000309428 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
RETREG3-201ENST00000309428 IGHV5-10-1A0A0J9YXX1 117 aa11.12□□□□□ -0.63
RETREG3-201ENST00000309428 ABHD16AO95870 558 aa11.12□□□□□ -0.63
RETREG3-201ENST00000309428 HNF1AP20823 631 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms