RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PCGF1Q9BSM1 259 aa16.45■□□□□ 0.22
VEGFB-201ENST00000309422 HES4Q9HCC6 221 aa16.45■□□□□ 0.22
VEGFB-201ENST00000309422 TMEM138Q9NPI0 162 aa16.45■□□□□ 0.22
VEGFB-201ENST00000309422 RPUSD1Q9UJJ7 312 aaKnown RBP16.45■□□□□ 0.22
VEGFB-201ENST00000309422 SONP18583 2426 aaKnown RBP16.44■□□□□ 0.22
VEGFB-201ENST00000309422 NF1P21359 2839 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 SETD2Q9BYW2 2564 aaPredicted RBP16.44■□□□□ 0.22
VEGFB-201ENST00000309422 IGKV1D-17A0A075B6S4 117 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 ZNF879B4DU55 563 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 SPRY1O43609 319 aaPredicted RBP16.44■□□□□ 0.22
VEGFB-201ENST00000309422 TOX4O94842 621 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 CD1AP06126 327 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 CHRM2P08172 466 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 PRKACAP17612 351 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 BDKRB2P30411 391 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 FGF12P61328 243 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 ACSM1Q08AH1 577 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 DGUOKQ16854 277 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 SPIN3Q5JUX0 258 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 DDI2Q5TDH0 399 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 SAXO1Q8IYX7 474 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 FAM58AQ8N1B3 248 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 TBC1D15Q8TC07 691 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 RGP1Q92546 391 aaPredicted RBP16.44■□□□□ 0.22
VEGFB-201ENST00000309422 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 SPACA5Q96QH8 159 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 JMJD8Q96S16 334 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 SUCNR1Q9BXA5 334 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 MS4A7Q9GZW8 240 aaPredicted RBP16.44■□□□□ 0.22
VEGFB-201ENST00000309422 FAM234AQ9H0X4 552 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 DUSP21Q9H596 190 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 CNTD2Q9H8S5 307 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 PAK1IP1Q9NWT1 392 aaPredicted RBP16.44■□□□□ 0.22
VEGFB-201ENST00000309422 MTCH1Q9NZJ7 389 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 NUP50Q9UKX7 468 aa16.44■□□□□ 0.22
VEGFB-201ENST00000309422 ABCA2Q9BZC7 2435 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 hCG_1809904A0A1W2PP81 198 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 A0A1W2PPE2 198 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 A0A1W2PR64 198 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 A0A1W2PRV1 198 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 RRP9O43818 475 aaKnown RBP16.43■□□□□ 0.22
VEGFB-201ENST00000309422 BCL3P20749 454 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 FAM185AQ8N0U4 392 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 SVOPQ8N4V2 548 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 ZNF485Q8NCK3 441 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 ZNRF1Q8ND25 227 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 TNFAIP8L1Q8WVP5 186 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 PGLYRP3Q96LB9 341 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 OR14A2Q96R54 314 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 DCTN5Q9BTE1 182 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 PCDHB16Q9NRJ7 776 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 ZNF222Q9UK12 451 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 KPTNQ9Y664 436 aa16.43■□□□□ 0.22
VEGFB-201ENST00000309422 SIRT4Q9Y6E7 314 aaPredicted RBP16.43■□□□□ 0.22
VEGFB-201ENST00000309422 YLPM1P49750 1951 aaKnown RBP16.43■□□□□ 0.22
VEGFB-201ENST00000309422 TRAV40A0A0B4J280 105 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 TRBV5-5A0A0J9YX44 114 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 A0A1B0GW55 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 ANGPTL7O43827 346 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L2P0CJ85 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L3P0CJ86 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L4P0CJ87 422 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L5P0CJ88 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L6P0CJ89 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L7P0CJ90 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 ZNF93P35789 620 aaPredicted RBP16.42■□□□□ 0.22
VEGFB-201ENST00000309422 GABARAPL2P60520 117 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 ERVK11-1P61568 191 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 PDCD1Q15116 288 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 RSU1Q15404 277 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 TRAM1Q15629 374 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4L9Q6RFH8 374 aaPredicted RBP16.42■□□□□ 0.22
VEGFB-201ENST00000309422 GDPD3Q7L5L3 318 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 OR13C5Q8NGS8 318 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 UPRTQ96BW1 309 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 SLITRK2Q9H156 845 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 EXOSC4Q9NPD3 245 aaKnown RBP16.42■□□□□ 0.22
VEGFB-201ENST00000309422 RBFOX1Q9NWB1 397 aaKnown RBP16.42■□□□□ 0.22
VEGFB-201ENST00000309422 DUX4Q9UBX2 424 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 OPN4Q9UHM6 478 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 MALRD1Q5VYJ5 2156 aa16.42■□□□□ 0.22
VEGFB-201ENST00000309422 NIPBLQ6KC79 2804 aaeCLIP16.42■□□□□ 0.22
VEGFB-201ENST00000309422 KDM4BO94953 1096 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 HAND1O96004 215 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 AVPP01185 164 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 ALDOBP05062 364 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 SELLP14151 372 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 FSTP19883 344 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 GABRR1P24046 479 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 PSMA1P25786 263 aaKnown RBP16.41■□□□□ 0.22
VEGFB-201ENST00000309422 SNU13P55769 128 aaKnown RBP16.41■□□□□ 0.22
VEGFB-201ENST00000309422 PAX2Q02962 417 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 KIR3DL3Q8N743 410 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 NKAIN3Q8N8D7 197 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 OR5D13Q8NGL4 314 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 WDFY2Q96P53 400 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 TMED9Q9BVK6 235 aa16.41■□□□□ 0.22
VEGFB-201ENST00000309422 A0A0A6YYJ9 748 aa16.4■□□□□ 0.22
VEGFB-201ENST00000309422 SH2D1BO14796 132 aa16.4■□□□□ 0.22
VEGFB-201ENST00000309422 MRPS14O60783 128 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms