RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 RAB39BQ96DA2 213 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 GNRHR2Q96P88 292 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 ANAPC10Q9UM13 185 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 RFNGQ9Y644 331 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 TRBV11-1A0A0K0K1C0 115 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 H0YL77 283 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF133P52736 654 aaPredicted RBP9.76□□□□□ -0.85
PTPN7-201ENST00000309017 OR1D5P58170 312 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 STARD6P59095 220 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 UBE2V2Q15819 145 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 PYY3Q5JQD4 70 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 AKR1C8PQ5T2L2 129 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 OR11L1Q8NGX0 322 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 MESP1Q9BRJ9 268 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 METTL9Q9H1A3 318 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 KLK3P07288 261 aaPredicted RBP9.76□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF266Q14584 549 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF429Q86V71 674 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 PRO1933Q9H354 126 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 SLC2A9Q9NRM0 540 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 UFSP2Q9NUQ7 469 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 CD207Q9UJ71 328 aa9.76□□□□□ -0.85
PTPN7-201ENST00000309017 OR5H15A6NDH6 313 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF587BE7ETH6 402 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 CST7O76096 145 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF17P17021 662 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 FASLGP48023 281 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 EFNA3P52797 238 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 GINS3Q9BRX5 216 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF442Q9H7R0 627 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 TREM2Q9NZC2 230 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 SSSCA1O60232 199 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 DHRS3O75911 302 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 PGA4P0DJD7 388 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 PGA3P0DJD8 388 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 HOXA5P20719 270 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 CSNK1A1P48729 337 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 DLK1P80370 383 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 SMAD4Q13485 552 aaKnown RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 USF2Q15853 346 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF695Q8IW36 515 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 MVB12AQ96EY5 273 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ABHD14AQ9BUJ0 271 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 OPA3Q9H6K4 179 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 C8orf33Q9H7E9 229 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 KNTC1P50748 2209 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 SHANK1Q9Y566 2161 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 SLC34A2O95436 690 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 FABP4P15090 132 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 FOLR1P15328 257 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ATP6V0CP27449 155 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 HTR5AP47898 357 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 RPL23AP62750 156 aaKnown RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 CCL20P78556 96 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 EWSR1Q01844 656 aaKnown RBP eCLIP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF239Q16600 458 aaKnown RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 OR2T2Q6IF00 324 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 HEPN1Q6WQI6 88 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 FAM89BQ8N5H3 189 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 CCDC71LQ8N9Z2 235 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 KDF1Q8NAX2 398 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-201ENST00000309017 PLPP5Q8NEB5 264 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 SUCNR1Q9BXA5 334 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 B3GAT1Q9P2W7 334 aa9.75□□□□□ -0.85
PTPN7-201ENST00000309017 LILRA5A6NI73 299 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 DBHP09172 617 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 GNRHRP30968 328 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 PMELP40967 661 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 NKX2-1P43699 371 aaPredicted RBP9.74□□□□□ -0.85
PTPN7-201ENST00000309017 IL13RA2Q14627 380 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 STX12Q86Y82 276 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 GJC3Q8NFK1 279 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 OR2AE1Q8NHA4 323 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 RNASE11Q8TAA1 199 aaKnown RBP9.74□□□□□ -0.85
PTPN7-201ENST00000309017 HAS2Q92819 552 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 BORCS8Q96FH0 119 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 NKX2-4Q9H2Z4 354 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 PARPBPQ9NWS1 579 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 HDGFL3Q9Y3E1 203 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 WSB1Q9Y6I7 421 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 FREM2Q5SZK8 3169 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 A0A1B0GX78 115 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 M0R135 149 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 NOVA1P51513 510 aaKnown RBP9.74□□□□□ -0.85
PTPN7-201ENST00000309017 TMEM187Q14656 261 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 PRAMEF20Q5VT98 475 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 TMEM123Q8N131 208 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 LYPD6BQ8NI32 183 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 PP6455Q8WZ26 134 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF799Q96GE5 643 aa9.74□□□□□ -0.85
PTPN7-201ENST00000309017 MEGF10Q96KG7 1140 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms