RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 HIST2H2BEQ16778 126 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 CLEC12BQ2HXU8 276 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.62□□□□□ -0.87
LSM3-201ENST00000306024 FAHD2BQ6P2I3 314 aaPredicted RBP9.62□□□□□ -0.87
LSM3-201ENST00000306024 KIRREL2Q6UWL6 708 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 CLEC18BQ6UXF7 455 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 HEPN1Q6WQI6 88 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 ARHGEF39Q8N4T4 335 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 ZPLD1Q8TCW7 415 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 HIST1H2BHQ93079 126 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 FAHD2AQ96GK7 314 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 HIST1H2BNQ99877 126 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 HIST1H2BMQ99879 126 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 STRAPQ9Y3F4 350 aaKnown RBP9.62□□□□□ -0.87
LSM3-201ENST00000306024 MRPS18BQ9Y676 258 aaKnown RBP9.62□□□□□ -0.87
LSM3-201ENST00000306024 V9GYS6 101 aa9.62□□□□□ -0.87
LSM3-201ENST00000306024 IGLV3-12A0A075B6K2 115 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 A6NIZ1 184 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TNFSF12O43508 249 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 IGKV1D-16P01601 117 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 RAP1BP61224 184 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 SLC22A6Q4U2R8 563 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TMEM225Q6GV28 225 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 MRPL14Q6P1L8 145 aaKnown RBP9.61□□□□□ -0.87
LSM3-201ENST00000306024 NUP54Q7Z3B4 507 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 OR2G3Q8NGZ4 309 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TOMM40LQ969M1 308 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 VSTM2BA6NLU5 285 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 H3BML4 177 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TCF21O43680 179 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 SFT2D2O95562 160 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 OPN1LWP04000 364 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 RPLP1P05386 114 aaKnown RBP9.61□□□□□ -0.87
LSM3-201ENST00000306024 PMELP40967 661 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 CYB561P49447 251 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 ARG2P78540 354 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 MESTQ5EB52 335 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 C17orf78Q8N4C9 275 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 ZFP62Q8NB50 900 aaPredicted RBP9.61□□□□□ -0.87
LSM3-201ENST00000306024 SPACA9Q96E40 222 aaPredicted RBP9.61□□□□□ -0.87
LSM3-201ENST00000306024 C4orf45Q96LM5 186 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 AQP10Q96PS8 301 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 KLK10O43240 276 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 DIRAS3O95661 229 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 IGKV3-11P04433 115 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 CST2P09228 141 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 PGA4P0DJD7 388 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 PGA5P0DJD9 388 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.61□□□□□ -0.87
LSM3-201ENST00000306024 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 SULF2Q8IWU5 870 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 OR10G3Q8NGC4 313 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 MYOZ1Q9NP98 299 aaPredicted RBP9.61□□□□□ -0.87
LSM3-201ENST00000306024 PITPNC1Q9UKF7 332 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 TMED3Q9Y3Q3 217 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 MED12Q93074 2177 aa9.61□□□□□ -0.87
LSM3-201ENST00000306024 PNMTP11086 282 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 KLK2P20151 261 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 IQCJQ1A5X6 159 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 TMEM123Q8N131 208 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 NECAP1Q8NC96 275 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 NPEPL1Q8NDH3 523 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 BHLHE23Q8NDY6 225 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 GALNT14Q96FL9 552 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 SLC5A7Q9GZV3 580 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 SLC26A1Q9H2B4 701 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 CHRNA9Q9UGM1 479 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 KLHDC2Q9Y2U9 406 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 WSB1Q9Y6I7 421 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 EREGO14944 169 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 GLI4P10075 376 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 SFTPDP35247 375 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 ASCL1P50553 236 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 PMS2P11Q13670 270 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 PLXDC2Q6UX71 529 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 ANGPTL5Q86XS5 388 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 MALSU1Q96EH3 234 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 RASL10BQ96S79 203 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 AK3Q9UIJ7 227 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 H0YL77 283 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 SLC33A1O00400 549 aaPredicted RBP9.6□□□□□ -0.87
LSM3-201ENST00000306024 RAMP1O60894 148 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 SERPINA7P05543 415 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 OR5I1Q13606 314 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 CBLN3Q6UW01 205 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 Q8WTZ3 238 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 ZNRF4Q8WWF5 429 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 ADAM19Q9H013 955 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 ALKBH4Q9NXW9 302 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 EMC9Q9Y3B6 208 aa9.6□□□□□ -0.87
LSM3-201ENST00000306024 XKRY2A2RUG3 117 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 MARCH11A6NNE9 402 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 CDKN2AP42771 156 aaKnown RBP9.59□□□□□ -0.87
LSM3-201ENST00000306024 SSX7Q7RTT5 188 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 OR14L1PQ8NHC6 308 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 OR10C1Q96KK4 312 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms