RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SRSF7Q16629 238 aaKnown RBP eCLIP16.68■□□□□ 0.26
HOXC4-201ENST00000303406 MPV17LQ2QL34 196 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF573Q86YE8 665 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 C17orf78Q8N4C9 275 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 CYYR1Q96J86 154 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 PKIBQ9C010 78 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 CDH20Q9HBT6 801 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 OBP2BQ9NPH6 170 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 CRIM1Q9NZV1 1036 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 MBD3L4A6NDZ8 208 aaPredicted RBP16.67■□□□□ 0.26
HOXC4-201ENST00000303406 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
HOXC4-201ENST00000303406 MBD3L5A6NJ08 208 aaPredicted RBP16.67■□□□□ 0.26
HOXC4-201ENST00000303406 L7N2F9 121 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 M0R233 179 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 MSTNO14793 375 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 SFT2D2O95562 160 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 TUBG1P23258 451 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 NPY4RP50391 375 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 GNG3P63215 75 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 OPCMLQ14982 345 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 EIF2S3LQ2VIR3 472 aaKnown RBP16.67■□□□□ 0.26
HOXC4-201ENST00000303406 Q6ZS49 121 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 GCNT2Q8N0V5 402 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 OR8H1Q8NGG4 311 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
HOXC4-201ENST00000303406 TMEM230Q96A57 120 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 ELMOD3Q96FG2 381 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 WDR89Q96FK6 387 aaPredicted RBP16.67■□□□□ 0.26
HOXC4-201ENST00000303406 TUBG2Q9NRH3 451 aa16.67■□□□□ 0.26
HOXC4-201ENST00000303406 SMPD2O60906 423 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 TSC22D2O75157 780 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 AKR1C4P17516 323 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 CXCL2P19875 107 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 PTGER4P35408 488 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 HAAOP46952 286 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 GPM6AP51674 278 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 TMEM65Q6PI78 240 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 ASCL5Q7RTU5 278 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF680Q8NEM1 530 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 OR5M9Q8NGP3 310 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 RTBDNQ9BSG5 229 aaPredicted RBP16.66■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF286AQ9HBT8 521 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 NECAP2Q9NVZ3 263 aa16.66■□□□□ 0.26
HOXC4-201ENST00000303406 RCC2Q9P258 522 aaKnown RBP16.66■□□□□ 0.26
HOXC4-201ENST00000303406 IGKV1D-8A0A087WSZ0 117 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 OR5H14A6NHG9 310 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 TRAPPC2LH3BP13 241 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 KLK10O43240 276 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 WISP2O76076 250 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 IFNA7P01567 189 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 CRYABP02511 175 aaKnown RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 SLC25A4P12235 298 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 RPA2P15927 270 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 SELEP16581 610 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 BCL3P20749 454 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 NPBWR2P48146 333 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 IL24Q13007 206 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 DAZAP2Q15038 168 aaPredicted RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF660Q6AZW8 331 aaPredicted RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 DHRS11Q6UWP2 260 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 CNEP1R1Q8N9A8 125 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 SNIP1Q8TAD8 396 aaKnown RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 MAFIPQ8WZ33 124 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 HDHD3Q9BSH5 251 aaPredicted RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 C12orf4Q9NQ89 552 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 SDCBPO00560 298 aaPredicted RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 LYZL6O75951 148 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 IGKV3-15P01624 115 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 CTSDP07339 412 aaPredicted RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 RAC2P15153 192 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 VAMP1P23763 118 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 HOXC12P31275 282 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 HTR2BP41595 481 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 PPP1CBP62140 327 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 IL13RA2Q14627 380 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 COQ8AQ8NI60 647 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 SLAMF9Q96A28 289 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 SPACA1Q9HBV2 294 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 DKK4Q9UBT3 224 aa16.65■□□□□ 0.26
HOXC4-201ENST00000303406 C14orf166Q9Y224 244 aaKnown RBP16.65■□□□□ 0.26
HOXC4-201ENST00000303406 TRAV14DV4A0A0A6YYC5 116 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 MPC2O95563 127 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 GLAP06280 429 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 SSTR2P30874 369 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 S100A11P31949 105 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 P2RY6Q15077 328 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 VWA1Q6PCB0 445 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 UNQ6126/PRO20091Q6UXV3 157 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 FAM169BQ8N8A8 192 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 WDR31Q8NA23 367 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 GTF3AQ92664 365 aaKnown RBP16.64■□□□□ 0.25
HOXC4-201ENST00000303406 RAB18Q9NP72 206 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 MTCH1Q9NZJ7 389 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 COMMD9Q9P000 198 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 PROCRQ9UNN8 238 aa16.64■□□□□ 0.25
HOXC4-201ENST00000303406 TUBAL3A6NHL2 446 aa16.63■□□□□ 0.25
HOXC4-201ENST00000303406 WDR1O75083 606 aa16.63■□□□□ 0.25
HOXC4-201ENST00000303406 TNFSF13O75888 250 aa16.63■□□□□ 0.25
HOXC4-201ENST00000303406 OR7C1O76099 320 aaPredicted RBP16.63■□□□□ 0.25
HOXC4-201ENST00000303406 CGAP01215 116 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms