RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 RASL11BQ9BPW5 248 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 COL18A1P39060 1754 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 PYCARD-AS1I3L0S3 204 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 FCMRO60667 390 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ZP3P21754 424 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 MDH2P40926 338 aaKnown RBP9.29□□□□□ -0.92
CLIP1-201ENST00000302528 RELBQ01201 579 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 MAMSTRQ6ZN01 415 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 WFDC3Q8IUB2 231 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 RAB1CQ92928 201 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 POM121Q96HA1 1249 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 GABRG3Q99928 467 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 TECRQ9NZ01 308 aaKnown RBP9.29□□□□□ -0.92
CLIP1-201ENST00000302528 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 PDE4DIPQ5VU43 2346 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 C3orf85A0A1B0GTC6 90 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 A0A1W2PR80 420 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 GSTZ1O43708 216 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF502Q8TBZ5 544 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 LRRC29Q8WV35 223 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 TEX37Q96LM6 180 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 DERL3Q96Q80 235 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 MRPL13Q9BYD1 178 aaKnown RBP9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ISG20L2Q9H9L3 353 aaKnown RBP9.29□□□□□ -0.92
CLIP1-201ENST00000302528 SLC25A19Q9HC21 320 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 IFITM10A6NMD0 228 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 PTHLHP12272 177 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 PLAURQ03405 335 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF766Q5HY98 468 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 MVB12AQ96EY5 273 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 PERPQ96FX8 193 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 GABARAPL3Q9BY60 117 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 TRAV17A0A0B4J275 112 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 K7ESM1 405 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 UBE2L6O14933 153 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 PARM1Q6UWI2 310 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 SMIM4Q8WVI0 70 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 PIK3IP1Q96FE7 263 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 MMP17Q9ULZ9 603 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 MOB4Q9Y3A3 225 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 MBTPS2O43462 519 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 EPXP11678 715 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 SUMO3P55854 103 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-201ENST00000302528 HLA-DRB3P79483 266 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 C19orf57Q0VDD7 668 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 LIAT1Q6ZQX7 453 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 C20orf196Q8IYI0 205 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 TBX15Q96SF7 602 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 MED19A0JLT2 244 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-201ENST00000302528 SLC17A2O00624 439 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 CAPZBP47756 277 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 GZMKP49863 264 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 OR10G8Q8NGN5 311 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 OR2T10Q8NGZ9 312 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ABHD3Q8WU67 409 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 SPACA9Q96E40 222 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-201ENST00000302528 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-201ENST00000302528 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 GPR87Q9BY21 358 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ZDHHC5Q9C0B5 715 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ARRDC1-AS1Q9H2J1 176 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 SDK1Q7Z5N4 2213 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 MARF1Q9Y4F3 1742 aaKnown RBP9.28□□□□□ -0.92
CLIP1-201ENST00000302528 EMP1P54849 157 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF273Q14593 569 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 SLC25A35Q3KQZ1 300 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 COX19Q49B96 90 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 FUNDC1Q8IVP5 155 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 OR1L6Q8NGR2 347 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 VSTM2AQ8TAG5 236 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 FAM131CQ96AQ9 280 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ELOVL1Q9BW60 279 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 TMPRSS13Q9BYE2 586 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 PDLIM7Q9NR12 457 aa9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ARID1BQ8NFD5 2236 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-201ENST00000302528 ALG1L2C9J202 215 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 SYNGR2O43760 224 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 HTRA3P83110 453 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 WIPI1Q5MNZ9 446 aaPredicted RBP9.27□□□□□ -0.92
CLIP1-201ENST00000302528 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 ZDHHC22Q8N966 263 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 KLHDC9Q8NEP7 349 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 RSG1Q9BU20 258 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 NAT8Q9UHE5 227 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 ANXA10Q9UJ72 324 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 LRP12Q9Y561 859 aa9.27□□□□□ -0.92
CLIP1-201ENST00000302528 C3orf80F5H4A9 247 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 LINC01387J3KSC0 135 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 KIR3DL2P43630 455 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 AFMIDQ63HM1 303 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 GLDNQ6ZMI3 551 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 KCNMB2Q9Y691 235 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms