RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OR1F12Q8NHA8 337 aa11.22□□□□□ -0.61
HIF3A-204ENST00000300862 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
HIF3A-204ENST00000300862 COLCA2A8K830 154 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 ZNF705EA8MWA4 302 aaPredicted RBP11.21□□□□□ -0.61
HIF3A-204ENST00000300862 IFNA2P01563 188 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 P04436 131 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 TSPO2Q5TGU0 170 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 CDCP2Q5VXM1 449 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 RPL7L1Q6DKI1 246 aaKnown RBP11.21□□□□□ -0.61
HIF3A-204ENST00000300862 RBMS3Q6XE24 437 aaKnown RBP11.21□□□□□ -0.61
HIF3A-204ENST00000300862 SLC16A13Q7RTY0 426 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 GGNQ86UU5 652 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 SULF2Q8IWU5 870 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 ABHD3Q8WU67 409 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 ZNF845Q96IR2 970 aaPredicted RBP11.21□□□□□ -0.61
HIF3A-204ENST00000300862 SULT4A1Q9BR01 284 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 METTL9Q9H1A3 318 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 TMEM38BQ9NVV0 291 aa11.21□□□□□ -0.61
HIF3A-204ENST00000300862 DOCK7Q96N67 2140 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 IGKV1-12A0A0C4DH73 117 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 NUDT19A8MXV4 375 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.62
HIF3A-204ENST00000300862 IGKV1D-12P01611 117 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 CYC1P08574 325 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 OR5H8P0DN80 308 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 RBMXP38159 391 aaKnown RBP11.21□□□□□ -0.62
HIF3A-204ENST00000300862 FXYD4P59646 89 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.62
HIF3A-204ENST00000300862 PSG4Q00888 419 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 RAB35Q15286 201 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 CEACAM16Q2WEN9 425 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 CLEC9AQ6UXN8 241 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 IL34Q6ZMJ4 242 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 OR10D3Q8NH80 312 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 HRH4Q9H3N8 390 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 DEPPQ9NTK1 212 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 LPAR3Q9UBY5 353 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 ANXA10Q9UJ72 324 aa11.21□□□□□ -0.62
HIF3A-204ENST00000300862 KIAA1549Q9HCM3 1950 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 TMEM238LA0A1B0GVL6 79 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 PINLYPA6NC86 204 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF716A6NP11 495 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF850A8MQ14 1090 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 SCGB1D2O95969 90 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 CLDN15P56746 228 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 IL15RAQ13261 267 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 FAM209BQ5JX69 171 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 SLC23A3Q6PIS1 610 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 PPP1R32Q7Z5V6 425 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 SKA3Q8IX90 412 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 GPR137CQ8N3F9 429 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 RHBDD1Q8TEB9 315 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 MRPL24Q96A35 216 aaKnown RBP11.2□□□□□ -0.62
HIF3A-204ENST00000300862 MARS2Q96GW9 593 aaKnown RBP11.2□□□□□ -0.62
HIF3A-204ENST00000300862 SMIM3Q9BZL3 60 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 SLC5A7Q9GZV3 580 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 RNF122Q9H9V4 155 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 DOCK10Q96BY6 2186 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 PRSS47A8MTI9 375 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 LRP3O75074 770 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF708P17019 499 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 TCN2P20062 427 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF92Q03936 586 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 ETV3LQ6ZN32 361 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 FBXL14Q8N1E6 418 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 NTNG2Q96CW9 530 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 BORCS8Q96FH0 119 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-204ENST00000300862 RHOFQ9HBH0 211 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 PADI1Q9ULC6 663 aa11.2□□□□□ -0.62
HIF3A-204ENST00000300862 DNAJC13O75165 2243 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
HIF3A-204ENST00000300862 LRRC3CA6NJW4 275 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 GJE1A6NN92 205 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 FBXO24O75426 580 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 NRASP01111 189 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 CBR1P16152 277 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 SRD5A2P31213 254 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-204ENST00000300862 PEA15Q15121 130 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 Q6ZSR3 168 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 SGPP2Q8IWX5 399 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 FOXB1Q99853 325 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 LSM5Q9Y4Y9 91 aaKnown RBP11.19□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF587BE7ETH6 402 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 AGPAT2O15120 278 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 FABP1P07148 127 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 SFTA3P0C7M3 94 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 SMIM6P0DI80 62 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 LYL1P12980 280 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 FOLR2P14207 255 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 NME2P22392 152 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 RBP2P50120 134 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 PIGPP57054 158 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 OR10AD1Q8NGE0 317 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms