RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PP6455Q8WZ26 134 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TMPRSS2O15393 492 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SPP1P10451 314 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TCL1AP56279 114 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TUSC1Q2TAM9 212 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SLC36A1Q7Z2H8 476 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FAM24BQ8N5W8 94 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR5D13Q8NGL4 314 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PRR7Q8TB68 274 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CT55Q8WUE5 264 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IL20Q9NYY1 176 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IGHV1OR21-1A0A087WYE8 117 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CRYABP02511 175 aaKnown RBP12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CTLA4P16410 223 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HLXQ14774 488 aaPredicted RBP12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZBTB37Q5TC79 503 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MRM1Q6IN84 353 aaKnown RBP12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IL22RA2Q969J5 263 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 K7ESF4 209 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NDUFB6O95139 128 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GZMKP49863 264 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RTP5Q14D33 572 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 C1QL3Q5VWW1 255 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR2A2Q6IF42 318 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 VWA1Q6PCB0 445 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CYSLTR2Q9NS75 346 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IL9P15248 144 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR8B12Q8NGG6 310 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RNF2Q99496 336 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 COA4Q9NYJ1 87 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GON4LQ3T8J9 2241 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CD200P41217 278 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SELENOPP49908 381 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 LIMS2Q7Z4I7 341 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SLIRPQ9GZT3 109 aaKnown RBP12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NKX2-2O95096 273 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MAGEA5P43359 124 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 EID2BQ96D98 161 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PECRQ9BY49 303 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IL36GQ9NZH8 169 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TRAV20A0A0B4J274 112 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR4C5Q8NGB2 326 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TMEM208Q9BTX3 173 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ADAP1O75689 374 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PMS2P11Q13670 270 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MMP26Q9NRE1 261 aa12.04□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MAP1LC3B2A6NCE7 125 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CISD3P0C7P0 127 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CD300CQ08708 224 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RNPS1Q15287 305 aaKnown RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MAP1LC3BQ9GZQ8 125 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TJP1Q07157 1748 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TMIGD3P0DMS9 266 aaPredicted RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 POLR2GP62487 172 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF385DQ9H6B1 395 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 KCNAB3O43448 404 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RPEL1Q2QD12 228 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ASB10Q8WXI3 467 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FLYWCH2Q96CP2 140 aaKnown RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TMEM65Q6PI78 240 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SPSB1Q96BD6 273 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 WDR61Q9GZS3 305 aaKnown RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RASL12Q9NYN1 266 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TTC3P53804 2025 aa12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TRAV17A0A0B4J275 112 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR2M5A3KFT3 312 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FCN1O00602 326 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SP1P08047 785 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PRR35P0CG20 571 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GLULP15104 373 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HTR1DP28221 377 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SLC25A1P53007 311 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TUSC5Q8IXB3 177 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR2A5Q96R48 311 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NAA60Q9H7X0 242 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 KCNJ3P48549 501 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms