RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 P4HTMQ9NXG6 502 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 CBR1P16152 277 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 SSR4P51571 173 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 DSCR4P56555 118 aaPredicted RBP21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 C9orf135Q5VTT2 229 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 LYSMD4Q5XG99 296 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 OPN5Q6U736 354 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 Q6ZPA2 131 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 PIGCQ92535 297 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 CFIP05156 583 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 RFPL3SP0C7P2 107 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 HIST1H3AP68431 136 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 HIST2H3PS2Q5TEC6 136 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 EIF5AL1Q6IS14 154 aaKnown RBP21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 SLC23A3Q6PIS1 610 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 HIST2H3AQ71DI3 136 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 SUMF1Q8NBK3 374 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 IFI44Q8TCB0 444 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 C14orf79Q96F83 325 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 IMMP1LQ96LU5 166 aa21.17■□□□□ 0.98
SPTSSA-201ENST00000298130 CCDC163A0A0D9SF12 145 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 C3orf80F5H4A9 247 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 EIF1BO60739 113 aaKnown RBP21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 KLF7O75840 302 aaPredicted RBP21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 STARD6P59095 220 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 FAM27BQ5VT28 67 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 RPS19BP1Q86WX3 136 aaKnown RBP21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 GLYATL2Q8WU03 294 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 NAA11Q9BSU3 229 aaPredicted RBP21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 ANGPTL4Q9BY76 406 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 ST3GAL6Q9Y274 331 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 RCL1Q9Y2P8 373 aaKnown RBP21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 PATE3B3GLJ2 98 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 SYNGR3O43761 229 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 CXCL13O43927 109 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 CD5P06127 495 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 CRYGSP22914 178 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 RGS19P49795 217 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF92Q03936 586 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 DUSP23Q9BVJ7 150 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 RPS10P5Q9NQ39 176 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 NECAP2Q9NVZ3 263 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 ZDHHC8Q9ULC8 765 aa21.16■□□□□ 0.98
SPTSSA-201ENST00000298130 TAAR5O14804 337 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 SNRNP70P08621 437 aaKnown RBP21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 RBP2P50120 134 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 TMEM187Q14656 261 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 OR1F12Q8NHA8 337 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 OR14L1PQ8NHC6 308 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 NAA60Q9H7X0 242 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 SLC2A9Q9NRM0 540 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF587BE7ETH6 402 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 TRAPPC6AO75865 159 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 NXPH3O95157 252 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 NRASP01111 189 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 NR2C1P13056 603 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 CHATP28329 748 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF133P52736 654 aaPredicted RBP21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 AVPI1Q5T686 147 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 TUBD1Q9UJT1 453 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 KCNIP3Q9Y2W7 256 aa21.15■□□□□ 0.98
SPTSSA-201ENST00000298130 PHF1O43189 567 aaPredicted RBP21.14■□□□□ 0.98
SPTSSA-201ENST00000298130 JTBO76095 146 aa21.14■□□□□ 0.98
SPTSSA-201ENST00000298130 KLK3P07288 261 aaPredicted RBP21.14■□□□□ 0.98
SPTSSA-201ENST00000298130 SUCLG1P53597 346 aaKnown RBP21.14■□□□□ 0.98
SPTSSA-201ENST00000298130 PSG4Q00888 419 aa21.14■□□□□ 0.98
SPTSSA-201ENST00000298130 IP6K3Q96PC2 410 aa21.14■□□□□ 0.98
SPTSSA-201ENST00000298130 AHCTF1Q8WYP5 2266 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 HSPB6O14558 160 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 TSPAN15O95858 294 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 CCNOP22674 350 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 NPBWR2P48146 333 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 EIF5AP63241 154 aaKnown RBP21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 IGSF11Q5DX21 431 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 CALHM1Q8IU99 346 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 COLCA2A8K830 154 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 NUDT19A8MXV4 375 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 FAM157AC9JC47 383 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 CCL2P13500 99 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 MRPS34P82930 218 aaKnown RBP21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 FOXL2NBQ6ZUU3 175 aa21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 EIF5A2Q9GZV4 153 aaKnown RBP21.14■□□□□ 0.97
SPTSSA-201ENST00000298130 FREM1Q5H8C1 2179 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 ZNF407Q9C0G0 2248 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 RRP8O43159 456 aaKnown RBP21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 VAMP5O95183 116 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 PRH1P02810 166 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 CEACAM16Q2WEN9 425 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 OR7C1O76099 320 aaPredicted RBP21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 RAC1P63000 192 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 WIPI1Q5MNZ9 446 aaPredicted RBP21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 PLCXD3Q63HM9 321 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 ZNF845Q96IR2 970 aaPredicted RBP21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 ZNF442Q9H7R0 627 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 PARP11Q9NR21 331 aa21.13■□□□□ 0.97
SPTSSA-201ENST00000298130 A0A087WZY1 265 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 NSG1A0A0A6YYJ2 146 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 OMGP23515 440 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 CARD18P57730 90 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 SNRPEP62304 92 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms