RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 IGKV1D-12P01611 117 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 IGKV3-15P01624 115 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 CISD2Q8N5K1 135 aaKnown RBP12.25□□□□□ -0.45
C9orf3-202ENST00000297979 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 DTD1Q8TEA8 209 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 BEX2Q9BXY8 128 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 MED28Q9H204 178 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 BEX1Q9HBH7 125 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-202ENST00000297979 OBP2BQ9NPH6 170 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 RAXQ9Y2V3 346 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 ERVH48-1M5A8F1 160 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 AMY2AP04746 511 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 GABRR1P24046 479 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 MEF2DQ14814 521 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 ZMYND11Q15326 602 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 SPATA46Q5T0L3 261 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 FBXW12Q6X9E4 464 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 C3P1Q6ZMU1 363 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 BHLHA15Q7RTS1 189 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-202ENST00000297979 CALHM1Q8IU99 346 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 ZSCAN4Q8NAM6 433 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-202ENST00000297979 GTF3AQ92664 365 aaKnown RBP12.25□□□□□ -0.45
C9orf3-202ENST00000297979 PECRQ9BY49 303 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 INTS1Q8N201 2190 aaKnown RBP12.25□□□□□ -0.45
C9orf3-202ENST00000297979 A0A1B0GUH1 482 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 SCAF4O95104 1147 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 MECP2P51608 486 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 PPP1CBP62140 327 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ARFRP1Q13795 201 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 RNASE10Q5GAN6 216 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF611Q8N823 705 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OR51F2Q8NH61 342 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 CA5BP1Q8WTZ4 195 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 PCDHB16Q9NRJ7 776 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF629Q9UEG4 869 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ANAPC10Q9UM13 185 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 SPENQ96T58 3664 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 AGFG2O95081 481 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OPN1MWP04001 364 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OPN1MW2P0DN77 364 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OPN1MW3P0DN78 364 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 GPM6AP51674 278 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ST3GAL2Q16842 350 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OR52W1Q6IF63 320 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 BEST4Q8NFU0 473 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ST8SIA4Q92187 359 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 MRPS24Q96EL2 167 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 HIST1H2AAQ96QV6 131 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 SFXN3Q9BWM7 321 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 C1QTNF6Q9BXI9 259 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 MPC1Q9Y5U8 109 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 PRRC2CQ9Y520 2896 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 PYCARD-AS1I3L0S3 204 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF735P0CB33 412 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 TBPP20226 339 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 CEACAM8P31997 349 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 CXADRP78310 365 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 CD276Q5ZPR3 534 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 SLC25A26Q70HW3 274 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OSR2Q8N2R0 312 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 BPIFB2Q8N4F0 458 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 OR5A2Q8NGI9 324 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 FYTTD1Q96QD9 318 aaKnown RBP12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ING3Q9NXR8 418 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 PLEKHA6Q9Y2H5 1048 aa12.24□□□□□ -0.45
C9orf3-202ENST00000297979 ANKRD11Q6UB99 2663 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-202ENST00000297979 DISC1C4P0D8 188 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 PRRG2O14669 202 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 ANXA7P20073 488 aaKnown RBP12.23□□□□□ -0.45
C9orf3-202ENST00000297979 BMI1P35226 326 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 ZFP69Q49AA0 526 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 CYYR1Q96J86 154 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 DMRTB1Q96MA1 342 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 OCSTAMPQ9BR26 566 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 AMDHD2Q9Y303 409 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 OR5H1A6NKK0 313 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF732B4DXR9 585 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 AKR7A2O43488 359 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 LILRA1O75019 489 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 CA11O75493 328 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 SFTPBP07988 381 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 UCP2P55851 309 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 FCN2Q15485 313 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 TAF9Q16594 264 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 GLDNQ6ZMI3 551 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-202ENST00000297979 TCTE3Q8IZS6 198 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 OR5P3Q8WZ94 311 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 SNAPC3Q92966 411 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 SLC6A7Q99884 636 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 OR2J1Q9GZK6 312 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 PLEKHJ1Q9NW61 149 aa12.23□□□□□ -0.45
C9orf3-202ENST00000297979 LAMA5O15230 3695 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms