RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 LDLRAD3Q86YD5 345 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 A0A1W2PPV4 95 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 C21orf140B9A014 251 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 CST4P01036 141 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 MT-ND4LP03901 98 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 NGFRP08138 427 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ACAA2P42765 397 aaKnown RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 C3AR1Q16581 482 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 DCAF10Q5QP82 559 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 CARFQ8N187 725 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ARRDC1Q8N5I2 433 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 RND1Q92730 232 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 TNS1Q9HBL0 1735 aaKnown RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 PTPRQQ9UMZ3 2332 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 CDRT15L2A8MXV6 281 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 PEBP1P30086 187 aaKnown RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 BTCP35070 178 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ID4P47928 161 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 DVL1P1P54792 670 aaPredicted RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 CATR1Q13166 79 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 OR2B11Q5JQS5 317 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 TMEM211Q6ICI0 200 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 DPPA2Q7Z7J5 298 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ASB5Q8WWX0 329 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 LIN37Q96GY3 246 aaPredicted RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 C19orf12Q9NSK7 152 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 GHRLQ9UBU3 117 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 TNFSF18Q9UNG2 199 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 MRPS18BQ9Y676 258 aaKnown RBP11.9□□□□□ -0.5
HPS3-201ENST00000296051 ACACBO00763 2458 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 GREB1Q4ZG55 1949 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ZNF816-ZNF321PA0A0X1KG74 233 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 A0A1W2PPQ1 181 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 HOXA1P49639 335 aaPredicted RBP11.9□□□□□ -0.51
HPS3-201ENST00000296051 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.51
HPS3-201ENST00000296051 FAM209BQ5JX69 171 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 D2HGDHQ8N465 521 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 ZNF321PQ8N8H1 164 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 GPX8Q8TED1 209 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 PCNX1Q96RV3 2341 aa11.9□□□□□ -0.51
HPS3-201ENST00000296051 TDRD15B5MCY1 1934 aaKnown RBP11.9□□□□□ -0.51
HPS3-201ENST00000296051 IAPPP10997 89 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 LTBRP36941 435 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 TECTBQ96PL2 329 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 FOXB1Q99853 325 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 MYO16Q9Y6X6 1858 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 C1QL1O75973 258 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 SFT2D2O95562 160 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
HPS3-201ENST00000296051 ZNF528Q3MIS6 628 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 LPAR3Q9UBY5 353 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 A0A0G2JK05 382 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 A0A1W2PP11 408 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 CCL21O00585 134 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 TUSC2O75896 110 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 IGKV1D-16P01601 117 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 RBP2P50120 134 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
HPS3-201ENST00000296051 MGAT2Q10469 447 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 TMEM41BQ5BJD5 291 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 SPANXN5Q5MJ07 72 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 MRGPREQ86SM8 312 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 OR6S1Q8NH40 331 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 OR10D3Q8NH80 312 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 RASL10BQ96S79 203 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 FAAP24Q9BTP7 215 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 KCNMB2Q9Y691 235 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 H7BYZ3 331 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 MUC1P15941 1255 aaPredicted RBP11.89□□□□□ -0.51
HPS3-201ENST00000296051 SLC25A45Q8N413 288 aa11.89□□□□□ -0.51
HPS3-201ENST00000296051 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
HPS3-201ENST00000296051 ANKUB1A6NFN9 424 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 SOX15O60248 233 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 WDR1O75083 606 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 HPP00738 406 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 IL3RAP26951 378 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 ZNRF4Q8WWF5 429 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 ANKRD9Q96BM1 317 aaPredicted RBP11.88□□□□□ -0.51
HPS3-201ENST00000296051 PIK3IP1Q96FE7 263 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 SCN4AP35499 1836 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 YIF1AO95070 293 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 TBPP20226 339 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 SHBQ15464 509 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 CDC20BQ86Y33 519 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 ZNF275Q9NSD4 429 aaPredicted RBP11.88□□□□□ -0.51
HPS3-201ENST00000296051 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 LINC01387J3KSC0 135 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms