RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PGA5P0DJD9 388 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 RGRP47804 291 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 H1FNTQ75WM6 255 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 MRC1P22897 1456 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 DYNLRB1Q9NP97 96 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 TMEFF2Q9UIK5 374 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 ZMIZ1Q9ULJ6 1067 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 SLC25A34Q6PIV7 304 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 ZDHHC8Q9ULC8 765 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 A6NNC1 897 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 PAFAH1B2P68402 229 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 BEX4Q9NWD9 120 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 SLC17A2O00624 439 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 ICOSLGO75144 302 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 CTAG2O75638 210 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 FAHP16930 419 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 CKS1BP61024 79 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 FUT7Q11130 342 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 DHRS7CA6NNS2 312 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 EGR3Q06889 387 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 ABLIM3O94929 683 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 TGIF2LYQ8IUE0 185 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 CES1P1Q9UKY3 287 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 ST3GAL6Q9Y274 331 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 CICQ96RK0 1608 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 SNRPCP09234 159 aaKnown RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 PRF1P14222 555 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 CSNK1EP49674 416 aaKnown RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 PLA1AQ53H76 456 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 SH2D5Q6ZV89 423 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 RAB40CQ96S21 281 aa10.55□□□□□ -0.72
SHROOM3-201ENST00000296043 LHFPL2Q6ZUX7 228 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 ST6GALNAC6Q969X2 333 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF121P58317 390 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 RPL18Q07020 188 aaKnown RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 GUCD1Q96NT3 240 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF142P52746 1687 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 TGIF1Q15583 401 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 DUSP5Q16690 384 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 FCRL6Q6DN72 434 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 LBX2Q6XYB7 198 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 CLDN10P78369 228 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 SYS1Q8N2H4 156 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 TMEM238LA0A1B0GVL6 79 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 A6NJY4 79 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 FXYD1O00168 92 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 WNT11O96014 354 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 UBALD1Q8TB05 177 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 TREM2Q9NZC2 230 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 VAX2Q9UIW0 290 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 PRR14LQ5THK1 2151 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 SLC39A5Q6ZMH5 540 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 PARM1Q6UWI2 310 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 WDFY1Q8IWB7 410 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 FAM71E1Q6IPT2 247 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 USP50Q70EL3 339 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 MISP3Q96FF7 219 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 HLA-GP17693 338 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 CST6Q15828 149 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 NUFIP2Q7Z417 695 aaKnown RBP10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 OR2T6Q8NHC8 308 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 MEGF9Q9H1U4 602 aa10.54□□□□□ -0.72
SHROOM3-201ENST00000296043 GFYI3L273 518 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 R3HDM4Q96D70 268 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ASB1Q9Y576 335 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 SCN11AQ9UI33 1791 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 SRP14P37108 136 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 RPS4XP62701 263 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 KIR2DS3Q14952 304 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ARRDC1Q8N5I2 433 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 C3P01024 1663 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF749O43361 778 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 NMBP08949 121 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ABHD17BQ5VST6 288 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 DECR2Q9NUI1 292 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 KLF7O75840 302 aaPredicted RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 RBP4P02753 201 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 HOXA6P31267 233 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF740Q8NDX6 193 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ADTRPQ96IZ2 230 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 A0A0U1RQF3 1178 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ACTL6AO96019 429 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 IL10RAQ13651 578 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 KHDC3LQ587J8 217 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 CBARPQ8N350 705 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms