RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 F5P12259 2224 aa15.59■□□□□ 0.09
PCDHA13-201ENST00000289272 NUP214P35658 2090 aaPredicted RBP15.59■□□□□ 0.09
PCDHA13-201ENST00000289272 DHRS3O75911 302 aa15.59■□□□□ 0.09
PCDHA13-201ENST00000289272 OR11G2Q8NGC1 345 aa15.59■□□□□ 0.09
PCDHA13-201ENST00000289272 NAT8BQ9UHF3 227 aa15.59■□□□□ 0.09
PCDHA13-201ENST00000289272 SLC45A2Q9UMX9 530 aa15.59■□□□□ 0.09
PCDHA13-201ENST00000289272 PIAS2O75928 621 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 SRP14P37108 136 aaKnown RBP15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 ELOBQ15370 118 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 ZIC1Q15915 447 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 Q6ZN92 141 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 ZG16BQ96DA0 208 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 GABRG3Q99928 467 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 MBD1Q9UIS9 605 aaPredicted RBP15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 ICAM5Q9UMF0 924 aa15.58■□□□□ 0.09
PCDHA13-201ENST00000289272 RBBP6Q7Z6E9 1792 aaKnown RBP15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 UBE2L5PA0A1B0GUS4 154 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 MASP2O00187 686 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 PDE6DO43924 150 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 EPPINO95925 133 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 HLA-GP17693 338 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 TMEM104Q8NE00 496 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 OR5AU1Q8NGC0 362 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 ISOC2Q96AB3 205 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 FCN1O00602 326 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 CDC42EP2O14613 210 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 FCARP24071 287 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 CSN1S1P47710 185 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 KISS1Q15726 138 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 BOD1Q96IK1 185 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 EMC6Q9BV81 110 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 TMEM191AQ9H0A3 160 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 NKX6-3A6NJ46 265 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 DEDDO75618 318 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 ACAA1P09110 424 aaPredicted RBP15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 ZNF117Q03924 483 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 ETFRF1Q6IPR1 90 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 LINC00469Q8N7U9 141 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 TREM2Q9NZC2 230 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 ING1Q9UK53 422 aaPredicted RBP15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 RPH3ALQ9UNE2 315 aa15.58■□□□□ 0.08
PCDHA13-201ENST00000289272 A0A1B0GTQ1 180 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 G3V3Y1 287 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 TOX3O15405 576 aaPredicted RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 CTSVO60911 334 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 HSPB1P04792 205 aaKnown RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 ZGLP1P0C6A0 271 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 GUCA2BQ16661 112 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 BTNL3Q6UXE8 466 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 C10orf111Q8N326 155 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 TSPAN32Q96QS1 320 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 RNF2Q99496 336 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 LRRC30A6NM36 301 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 OR4C45A6NMZ5 311 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 PRRG2O14669 202 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 ADAP1O75689 374 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 EIF3GO75821 320 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 CYB5R3P00387 301 aaPredicted RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 PMCHP20382 165 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 THSD4Q6ZMP0 1018 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 LDLRAD3Q86YD5 345 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 H1FOOQ8IZA3 346 aaPredicted RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 CPEB3Q8NE35 698 aaKnown RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 OR4D9Q8NGE8 314 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 ESRP2Q9H6T0 727 aaKnown RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 ZNF552Q9H707 407 aaPredicted RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 PPP1R3CQ9UQK1 317 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 LIPGQ9Y5X9 500 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 PITX3O75364 302 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 GPR12P47775 334 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 IL11RAQ14626 422 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 MPV17LQ2QL34 196 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 FFAR4Q5NUL3 377 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 VAX1Q5SQQ9 334 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 OR51B6Q9H340 312 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 CNTD2Q9H8S5 307 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 DHHO43323 396 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 ADAM20O43506 726 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 MUC1P15941 1255 aaPredicted RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 FSTP19883 344 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 OCIAD1Q9NX40 245 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 YBX2Q9Y2T7 364 aaKnown RBP15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 KCNK7Q9Y2U2 307 aa15.57■□□□□ 0.08
PCDHA13-201ENST00000289272 MYPOPQ86VE0 399 aaPredicted RBP15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 SIPA1L1O43166 1804 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 CD99P14209 185 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 RPS27P42677 84 aaKnown RBP15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 HLA-BQ31612 363 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 C9orf135Q5VTT2 229 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 C19orf48Q6RUI8 117 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 NUFIP2Q7Z417 695 aaKnown RBP15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 LRP11Q86VZ4 500 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 EXTL1Q92935 676 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 SNX22Q96L94 193 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 ARRDC1-AS1Q9H2J1 176 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 MYOZ1Q9NP98 299 aaPredicted RBP15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 RCC2Q9P258 522 aaKnown RBP15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 SH3BGRL2Q9UJC5 107 aa15.56■□□□□ 0.08
PCDHA13-201ENST00000289272 PLXNB2O15031 1838 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms