RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 A0A1B0GW64 132 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 MPIG6BO95866 241 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 AMY2BP19961 511 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 PKIAP61925 76 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 HIST1H3AP68431 136 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 HIST2H3PS2Q5TEC6 136 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 ZNF610Q8N9Z0 462 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 OR10D4PQ8NGN7 298 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 MUCL1Q96DR8 90 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 GALNT14Q96FL9 552 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 SMIM3Q9BZL3 60 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 BORCS7-ASMTA0A0B4J1R7 106 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 IGKV1-9A0A0C4DH69 117 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 H7C1Q1 480 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 F10P00742 488 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 GIMD1P0DJR0 217 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 ZNF41P51814 821 aaPredicted RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 SLC35A1P78382 337 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 BEND4Q6ZU67 534 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 RTN4RL2Q86UN3 420 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 LFNGQ8NES3 379 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 PP6455Q8WZ26 134 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 ARHGAP5-AS1Q96IT6 56 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 PIGQQ9BRB3 760 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 CACNA1CQ13936 2221 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 AKAP13Q12802 2813 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 DKK1O94907 266 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 GLRA1P23415 457 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 DDTP30046 118 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 RBMXP38159 391 aaKnown RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 OR3A2P47893 321 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 DEFB133Q30KQ1 61 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 SOHLH1Q5JUK2 328 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 C10orf128Q5T292 105 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 ABHD12BQ7Z5M8 362 aaPredicted RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 LRRC18Q8N456 261 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 OR5L2Q8NGL0 311 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 MEGF10Q96KG7 1140 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 FBXO7Q9Y3I1 522 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 SPENQ96T58 3664 aaKnown RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 DHRS7CA6NNS2 312 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 TSTD3H0UI37 97 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 RPL36A-HNRNPH2H7BZ11 118 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 CTSDP07339 412 aaPredicted RBP9.08□□□□□ -0.96
SKA1-201ENST00000285116 OR13C7P0DN81 318 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 LMO1P25800 156 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 OR1D5P58170 312 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 SSX2Q16385 188 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 SUMF2Q8NBJ7 301 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 FNDC9Q8TBE3 224 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 GINS3Q9BRX5 216 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 PECRQ9BY49 303 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 ZNF319Q9P2F9 582 aa9.08□□□□□ -0.96
SKA1-201ENST00000285116 PUS1Q9Y606 427 aaKnown RBP eCLIP9.08□□□□□ -0.96
SKA1-201ENST00000285116 CEP192Q8TEP8 1941 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 AQP7P3A6NL99 342 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 ZNF587BE7ETH6 402 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 PPP1R2P9O14990 202 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 PIAS2O75928 621 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 GLB1P16278 677 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 OTX1P32242 354 aaPredicted RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 SNU13P55769 128 aaKnown RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 SMAD4Q13485 552 aaKnown RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 RSU1Q15404 277 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 ZNF674Q2M3X9 581 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 RNF144BQ7Z419 303 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 TSTD1Q8NFU3 115 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 STT3BQ8TCJ2 826 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 UNKLQ9H9P5 680 aaKnown RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 C14orf166Q9Y224 244 aaKnown RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 TERTO14746 1132 aaKnown RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 CRTAPO75718 401 aaPredicted RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 IFNA21P01568 189 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 PRH1P02810 166 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 HPNP05981 417 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 HCKP08631 526 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 P2RY1P47900 373 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 SPCS3P61009 180 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 KISS1Q15726 138 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 DMRTC2Q8IXT2 367 aaPredicted RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 OR2M3Q8NG83 312 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 ERGIC1Q969X5 290 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 SSX3Q99909 188 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 EMC6Q9BV81 110 aa9.07□□□□□ -0.96
SKA1-201ENST00000285116 DUSP15Q9H1R2 295 aaPredicted RBP9.07□□□□□ -0.96
SKA1-201ENST00000285116 A0A087WWC5 75 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 CXorf65A6NEN9 183 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 CRYM-AS1A6NIL9 109 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 CSNK2A1P68400 391 aaPredicted RBP9.06□□□□□ -0.96
SKA1-201ENST00000285116 LRTM2Q8N967 370 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 CSNK2A3Q8NEV1 391 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 TMEM54Q969K7 222 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 NTNG2Q96CW9 530 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 SHDQ96IW2 340 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 FGF21Q9NSA1 209 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HSF4Q9ULV5 492 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms