RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RAC1P63000 192 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 MST1LQ2TV78 715 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 DEFB109BQ30KR1 87 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 PRAMEF20Q5VT98 475 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 RPUSD3Q6P087 351 aaKnown RBP11.24□□□□□ -0.61
C9orf3-201ENST00000277198 GALNTL5Q7Z4T8 443 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 C20orf196Q8IYI0 205 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 SEMA6DQ8NFY4 1073 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 OR5D18Q8NGL1 313 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 OR4A4PQ8NGN8 299 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 FNDC9Q8TBE3 224 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 ROBO4Q8WZ75 1007 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 POM121Q96HA1 1249 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 PIGQQ9BRB3 760 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 METTL9Q9H1A3 318 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 TAF9BQ9HBM6 251 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 SH2D2AQ9NP31 389 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 ZFP57Q9NU63 452 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ZIC3O60481 467 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 HKR1P10072 659 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ICAM2P13598 275 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 KLK2P20151 261 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 SULT1A2P50226 295 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ARHGDIBP52566 201 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 RBM39Q14498 530 aaKnown RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 RAB35Q15286 201 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 CNN3Q15417 329 aaKnown RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 PHYHD1Q5SRE7 291 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 H3F3CQ6NXT2 135 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 HAGHLQ6PII5 290 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 DHRS11Q6UWP2 260 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ASCL4Q6XD76 172 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 IQCF2Q8IXL9 164 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF843Q8N446 348 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF385AQ96PM9 386 aaKnown RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF2Q9BSG1 426 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 PLEKHA2Q9HB19 425 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 PARP11Q9NR21 331 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 HPF1Q9NWY4 346 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 PLEK2Q9NYT0 353 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ANXA10Q9UJ72 324 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 KCNIP3Q9Y2W7 256 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 KLF2Q9Y5W3 355 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 C5orf63A6NC05 138 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 OR5H15A6NDH6 313 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 K7EPK0 472 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 DEDDO75618 318 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 CBR3O75828 277 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 KNG1P01042 644 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 KLK3P07288 261 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 HOXB5P09067 269 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 CRYGSP22914 178 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 PTGER4P35408 488 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 GUCA2BQ16661 112 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 IAH1Q2TAA2 248 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 HFEQ30201 348 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 GPR137CQ8N3F9 429 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 FAM71E2Q8N5Q1 922 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 BOLLQ8N9W6 283 aaKnown RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 OR51F2Q8NH61 342 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 SGK3Q96BR1 496 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 GALNT14Q96FL9 552 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 MICU1Q9BPX6 476 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 RBM24Q9BX46 236 aaKnown RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 RHOFQ9HBH0 211 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF701Q9NV72 531 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-201ENST00000277198 GSKIPQ9P0R6 139 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF175Q9Y473 711 aa11.23□□□□□ -0.61
C9orf3-201ENST00000277198 PCSK5Q92824 1860 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 PHF3Q92576 2039 aaKnown RBP11.22□□□□□ -0.61
C9orf3-201ENST00000277198 CST2P09228 141 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF708P17019 499 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 RPL12P30050 165 aaKnown RBP11.22□□□□□ -0.61
C9orf3-201ENST00000277198 SSR4P51571 173 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 MTCP1P56278 107 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 S100A10P60903 97 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 FAM3AP98173 230 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 RAET1LQ5VY80 246 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 TMEM268Q5VZI3 342 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 NPRL2Q8WTW4 380 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 TLNRD1Q9H1K6 362 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 RGCCQ9H4X1 137 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 ELL3Q9HB65 397 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-201ENST00000277198 TREM1Q9NP99 234 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 NECAP2Q9NVZ3 263 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
C9orf3-201ENST00000277198 MCTS1Q9ULC4 181 aaKnown RBP11.22□□□□□ -0.61
C9orf3-201ENST00000277198 COL6A6A6NMZ7 2263 aa11.22□□□□□ -0.61
C9orf3-201ENST00000277198 SIGLEC5O15389 551 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 SFTPBP07988 381 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 OR5H8P0DN80 308 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 TMEM225BP0DP42 221 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 PVALBP20472 110 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-201ENST00000277198 F2RL1P55085 397 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 RAC3P60763 192 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms